Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0598 ATGGGTTATGACTGCATGAGAAGCTTGCAGTGCTGTGGGAACTTGTCACCACAGCCACACTATCCGTCGATGACGAAAGGGACGTCACAGATTGAAGGATCAGAGGCTAAAGTGGTTTTCAACGTTATGGGAATGACGTGCGCTGCTTGCGCTGGATCCGTCGAGAAAGCCATCAAACGCTTACCGGGGATTCGACAGGCTTTCGTTGATGTCTTGAATGATAAAGCACAGGTTCTTTACTACCCGTCTATGGTTAACAAGGAGAGGATACGTGAGGCCATTGAAGATGCGGGATTTGAAGCGAATCCCATGGAGGAAGACTCCAACGACACATCCACTCAAATATGTCGAATACACATAAGGGGAATGACTTGTACTTCTTGTTCCTCCACCATTGAATCAGTTCTACAAACCCTTCGTGGGGTGCACAAAGCACAAGTGGCCTTGGCAACTGAAGAAGCTGAAGTTCGCTATGACCCTAAGATTGTCAACCACAATCAGCTAATGGAAGCTATACAAGACACTGGCTTCGAAGCCGTATTAATAAGCACTGGAGAACACATAAGCAAGATAGAACTTAAAATTGATGGCCTTAAAAACGAGCAATCCTTGGATACCATTCAACGATCTATCCATTGCCTCTCAGGTGTTGAAACCATAGATATATATCCTGACATTAACAAAATTGCCATAACTTATAAACCATACATGACAGGACCAAGAACCTTCATTGAAGTCATAGAATCCACAGGATCAGGGTGTTTTAAAGCAGTGATATTTCCAAATGATGGAGGAAGAGAAGCACGTAGACAACAAGAAATCAACCGATACTTCAACCTATTCATATGGAGTTTGGCTTTCACCATTCCGGTGTTTTTGACATCTATGGTGCTTATGTATATACCTGGAGTTAAACGTGTTTTAGATGTCAAAGTTGTGAATATGCTAAAGATTGGACTACTTTTGAGGTGTGAATTTGCCACCCCCGTACAGTTTATCATAGGTAGGAGGTTCTATGTTGGAGCCTATAAAGCATTGCGCAAAGGTTCTGCTAACATGGATGTGTTGATAGCCTTAGGGACAAATGCGGCCTACTTCTATTCTGTGTATGTTGTGGAAAGAGCTTCTTTCTCTCGGCATTTCAAAGGCAACGATTTTTTTGAGACAAGCTCTATGCTTATTTCGTTTATTCTACTTGGGAAGTATTTGGAAGTGTTGGCAAAGGGGAAGACATCTCAGGCCATTGCCAAGCTTATGGACTTGACACCTGAGACAGCAACCTTGTTGACTCTAGATGATGAGGGAAATGTTGTTAGTGAACAACAAATTGATAGCCGGTTGATACAAAAGAACGATGTGATCAAAGTTGTTCCTGGTGCAAAAGTAGCATCGGATGGTCTTGTCATTTGGGGACAAAGTCATGTAAACGAGAGCATGATAACTGGAGAGGCGAGGCCTGTGGCTAAGAAAAAGGGTGATATGGTGATTGGAGGCACTGTAAATGAGAATGGTGTTTTTCACGTTAAGGTGACTAGGGTTGGATCAGAGAGTGCTCTCTTTCAGATTGTTCGACTCGTTGAGTCTGCCCAGATGGGTAAAGCTCCCGTTCAAAAGCTTGCAGACCATATTTCTAAATATTTTGTTCCTTTGGTCATTGTGCTTTCCCTTTCAACATGGTTTTCATGGTTTCTAGCTGGAAAGTTACATGCATACCCAAAATCCTGGATACCATCCTCCATGAACAACTTTGAGCTTGCACTTCAGTTTGGGATTTCGGTCATGGTCATTGCCTGCCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCTGTTATGGTTGGTACAGGAGTTGGTGCAACACAAGGTGTGTTGATCAAAGGGGGGCAAGCATTAGAAAGTGCACACAAGGTGAATTGCATTGTGTTTGATAAGACAGGGACTCTCACAATTGGGAAGCCAGTGGTTGTAACTACAAAACTCTTCAAAAAGATGTCACTTGAAGATTTCTATGAATTTGCTGCTGCAGCTGAGGCGAACAGCGAACATCCAATAGCCAAGGCCATTGTTGAGCACGCCAAAAGGATCATAGCAGATGAACACAATCATCCCTGGCCAGAAGCACGGGACTTTGTTTCTGTTTCAGGTCATGGAGTGAAGGCCATTGTTCGAAACAAGGAAATAATGGTTGGGAATAAAAAATTGATGGTGGACCATAACATACTCATTTCAACCGACGCTGAAGAAACGCTAGCAGAAGCTGAAAGCCTAGCTCAAACTGGGATATTAGTATCTTTGGATGGAGAAGTTGCTGGAGTTATGGCTGTATCTGATCCATTGAAACCTGGTGCCAAAGAAGTTATTTCCATTCTTAATTCCATGAAAATCAGAAGCATCATGGTGACAGGTGATAATTGGGGAACTGCCAATTCCATAGCCAGACAAGCTGGTATTGAAACTGTTATGGCAGAGGCTCAACCTGAGATTAAGGCAACTAAAATAAAAGAATTGCAGAGTTGCGGGTACAATGTGGCAATGGTGGGAGATGGCATAAACGACTCTCCAGCACTTGTGGCAGCTGATGTTGGAATGGCAATAGGTGCGGGCACAGACATAGCTATTGAGGCAGCTGACATTGTTCTGATGAAGAGCAACTTGGAGGATATAATAATTGCTATTGACCTTGCAAACAAAACTTTCTCTCGTATACGTCTGAACTACATTTGGGCTTTGGGTTACAACTTGCTAGCCATCCCTATTGCTGCGGGCATCCTTTACCCATCCACTAAATTCCGATTACCACCATGGATTGCTGGAGCTGCAATGGCTGCCTCTTCTATCAGTGTTGTTTGCTCCTCCCTCTTGTTAAAGAATTACAAGAGACCAAGCAAGCTAAACAATTTGGAGATAAATGGTATCAAGATTGAATAA 2925 0.4325 MGYDCMRSLQCCGNLSPQPHYPSMTKGTSQIEGSEAKVVFNVMGMTCAACAGSVEKAIKRLPGIRQAFVDVLNDKAQVLYYPSMVNKERIREAIEDAGFEANPMEEDSNDTSTQICRIHIRGMTCTSCSSTIESVLQTLRGVHKAQVALATEEAEVRYDPKIVNHNQLMEAIQDTGFEAVLISTGEHISKIELKIDGLKNEQSLDTIQRSIHCLSGVETIDIYPDINKIAITYKPYMTGPRTFIEVIESTGSGCFKAVIFPNDGGREARRQQEINRYFNLFIWSLAFTIPVFLTSMVLMYIPGVKRVLDVKVVNMLKIGLLLRCEFATPVQFIIGRRFYVGAYKALRKGSANMDVLIALGTNAAYFYSVYVVERASFSRHFKGNDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPETATLLTLDDEGNVVSEQQIDSRLIQKNDVIKVVPGAKVASDGLVIWGQSHVNESMITGEARPVAKKKGDMVIGGTVNENGVFHVKVTRVGSESALFQIVRLVESAQMGKAPVQKLADHISKYFVPLVIVLSLSTWFSWFLAGKLHAYPKSWIPSSMNNFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVTTKLFKKMSLEDFYEFAAAAEANSEHPIAKAIVEHAKRIIADEHNHPWPEARDFVSVSGHGVKAIVRNKEIMVGNKKLMVDHNILISTDAEETLAEAESLAQTGILVSLDGEVAGVMAVSDPLKPGAKEVISILNSMKIRSIMVTGDNWGTANSIARQAGIETVMAEAQPEIKATKIKELQSCGYNVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLANKTFSRIRLNYIWALGYNLLAIPIAAGILYPSTKFRLPPWIAGAAMAASSISVVCSSLLLKNYKRPSKLNNLEINGIKIE* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0598 974 Pfam Heavy-metal-associated domain 39 100 IPR006121 GO:0046872
Apr7g0598 974 Pfam Heavy-metal-associated domain 118 178 IPR006121 GO:0046872
Apr7g0598 974 Gene3D - 32 102 - -
Apr7g0598 974 CDD HMA 120 179 IPR006121 GO:0046872
Apr7g0598 974 SUPERFAMILY Calcium ATPase, transmembrane domain M 391 632 IPR023298 -
Apr7g0598 974 PRINTS Copper-transporting ATPase 1 signature 37 62 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase 1 signature 63 86 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase 1 signature 92 112 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase 1 signature 138 159 - -
Apr7g0598 974 SUPERFAMILY HMA, heavy metal-associated domain 33 107 IPR036163 GO:0046872
Apr7g0598 974 ProSitePatterns Heavy-metal-associated domain. 120 149 IPR017969 GO:0046872
Apr7g0598 974 CDD P-type_ATPase_Cu-like 281 956 - -
Apr7g0598 974 SFLD p-type atpase 622 896 IPR044492 -
Apr7g0598 974 Gene3D - 113 185 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase signature 338 357 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase signature 390 409 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase signature 410 428 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase signature 623 638 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase signature 822 839 - -
Apr7g0598 974 PRINTS Copper-transporting ATPase signature 918 932 - -
Apr7g0598 974 Gene3D - 726 776 IPR023299 GO:0000166
Apr7g0598 974 Gene3D - 647 725 IPR023299 GO:0000166
Apr7g0598 974 ProSitePatterns Heavy-metal-associated domain. 42 71 IPR017969 GO:0046872
Apr7g0598 974 Gene3D - 408 530 - -
Apr7g0598 974 ProSiteProfiles Heavy-metal-associated domain profile. 37 103 IPR006121 GO:0046872
Apr7g0598 974 ProSitePatterns E1-E2 ATPases phosphorylation site. 642 648 IPR018303 -
Apr7g0598 974 Pfam E1-E2 ATPase 421 618 - -
Apr7g0598 974 ProSiteProfiles Heavy-metal-associated domain profile. 115 181 IPR006121 GO:0046872
Apr7g0598 974 Gene3D - 607 902 IPR023214 -
Apr7g0598 974 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 28 965 - -
Apr7g0598 974 SUPERFAMILY HAD-like 639 951 IPR036412 -
Apr7g0598 974 SUPERFAMILY HMA, heavy metal-associated domain 185 254 IPR036163 GO:0046872
Apr7g0598 974 SUPERFAMILY HMA, heavy metal-associated domain 112 186 IPR036163 GO:0046872
Apr7g0598 974 Pfam haloacid dehalogenase-like hydrolase 636 859 - -
Apr7g0598 974 ProSiteProfiles Heavy-metal-associated domain profile. 190 251 IPR006121 GO:0046872
Apr7g0598 974 PRINTS P-type cation-transporting ATPase superfamily signature 476 490 - -
Apr7g0598 974 PRINTS P-type cation-transporting ATPase superfamily signature 640 654 - -
Apr7g0598 974 PRINTS P-type cation-transporting ATPase superfamily signature 770 781 - -
Apr7g0598 974 PRINTS P-type cation-transporting ATPase superfamily signature 792 802 - -
Apr7g0598 974 PRINTS P-type cation-transporting ATPase superfamily signature 845 864 - -
Apr7g0598 974 PRINTS P-type cation-transporting ATPase superfamily signature 868 880 - -
Apr7g0598 974 PANTHER ATP7, ISOFORM B 28 965 - -
Apr7g0598 974 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 353 954 IPR027256 GO:0006812|GO:0016021|GO:0019829
Apr7g0598 974 CDD HMA 39 101 IPR006121 GO:0046872
Apr7g0598 974 SUPERFAMILY Calcium ATPase, transduction domain A 440 526 IPR008250 -
Apr7g0598 974 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 393 924 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr7g0598 974 SFLD C1.7: P-type atpase like 622 896 - -
Apr7g0598 974 TIGRFAM TIGR00003: copper ion binding protein 37 101 IPR006122 GO:0005507
Apr7g0598 974 TIGRFAM TIGR00003: copper ion binding protein 118 179 IPR006122 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0598 Apr-Chr7 12521566 12528305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0598 30 974 Primary Pumps ATPases AT1G63440 72.181 0.0 1430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0598 K17686 - gmx:100817431 1636.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0598 7 12521566 12528305 Apr7g0598 7 12521566 12528305 ECH