Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0594 ATGGATGGGAGAGAAGCTATGGCATTTTCTGGCGGTTCTGCTCCATATTACATGCAGCATAGGGGAGGGGTTGGAGGGTCTGGTTCTGGAGCACAGAGTGAAGGGTTCCAAGCACCCTCTGGGTTCAGAGCTTTGTCAAGTGTCAGGGGTGACTCTATAGGTTCTACATTTTCAGTAGAGCCCCAGCGTGGTAGTTTTGGTCATGGCATTAACATGGGTTCTTCTCCTGATCATGGAGTACCTTCTTCTGTAGGTCCTGTGAAAAAGAAAAGAGGGAGGCCTCGTAAGTACGGTCCTGATGGACCAGTTTCTTTGAGACTCTCTCCCATGTCTGCCACTGCTAATTCCAACCCTGCTTCAAGTACTTCTTCCCAGAAACGGCCTAGAGGGCGCCCACCTGGAAGTGGAAGGAAGCAACAGTTAGCCACTCTAGGTGAATGGATGAACAGTTCTGCAGGACTGGCTTTTTCACCTCATGTTATCACCGTTGGTGTTGGGGAGGACATTGTAGGAAAGTTATTGTCATTTTCACAGCAGAGACCAAGGGCAGTATGCATCTTATCAGGAACTGGGACAGTTTCTTCAGTCACTCTGCGCCAGCCAGCTTCTACTAGCGTCAGTGTTACATATGAGGGCCGATTTCAAATATTATGTTTGTCTGGTTCTTACTTAGTTGCTGAAGATGGCGGACCTCGCAACAGAACTGGTGGCATGAGTGTTTCCCTTTCTAGTCCTGATGGTCATGTTATTGGTGGTGGTGTTGCTAGGCTTATTGCTGCGAGTCCAGTGCAGGTTGTAGTATGCACTTTTGTTTATGGAGGCTCTAAGCCAAAAGCTAAGCAAGGGAAAGATAGTGGTTCAGAGCCTCAGAGTAGTGATAAGTTAGCTTCTCCAGCCAGTGCCCCACCTAATCAAAACTACAACTCTTCTTCTGCAGCAGGCATTTGGCCTGGATCAAGACCGGTAGATGTGAAAAGTCCACATCCACACACTGGTATTGACTTGACGCGTGGGTGA 1017 0.4838 MDGREAMAFSGGSAPYYMQHRGGVGGSGSGAQSEGFQAPSGFRALSSVRGDSIGSTFSVEPQRGSFGHGINMGSSPDHGVPSSVGPVKKKRGRPRKYGPDGPVSLRLSPMSATANSNPASSTSSQKRPRGRPPGSGRKQQLATLGEWMNSSAGLAFSPHVITVGVGEDIVGKLLSFSQQRPRAVCILSGTGTVSSVTLRQPASTSVSVTYEGRFQILCLSGSYLVAEDGGPRNRTGGMSVSLSSPDGHVIGGGVARLIAASPVQVVVCTFVYGGSKPKAKQGKDSGSEPQSSDKLASPASAPPNQNYNSSSAAGIWPGSRPVDVKSPHPHTGIDLTRG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0594 338 CDD DUF296 158 270 IPR005175 -
Apr7g0594 338 ProSiteProfiles PPC domain profile profile. 150 299 IPR005175 -
Apr7g0594 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 338 IPR039605 GO:0003680
Apr7g0594 338 MobiDBLite consensus disorder prediction 108 129 - -
Apr7g0594 338 MobiDBLite consensus disorder prediction 1 38 - -
Apr7g0594 338 MobiDBLite consensus disorder prediction 53 139 - -
Apr7g0594 338 Gene3D - 158 285 - -
Apr7g0594 338 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 1 338 - -
Apr7g0594 338 PRINTS AT-hook-like domain signature 88 98 IPR017956 GO:0003677
Apr7g0594 338 PRINTS AT-hook-like domain signature 124 135 IPR017956 GO:0003677
Apr7g0594 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 158 271 IPR005175 -
Apr7g0594 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 155 271 - -
Apr7g0594 338 MobiDBLite consensus disorder prediction 284 315 - -
Apr7g0594 338 MobiDBLite consensus disorder prediction 277 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0594 Apr-Chr7 12474197 12478491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0594 1 338 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 51.444 6.96e-101 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0594 - - gmx:100790569 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0594 7 12474197 12478491 Apr7g0594 7 12474197 12478491 ECH
Apr7g0594 7 12474197 12478491 Apr2g1192 2 18124104 18128239 PCT