Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0591 ATGCTGGCAGAGAACCTAAAGAAACAACTTGCTTTAGCAGTGAAAAGCATTAACTGGAACTATGCAATCTTCTGGTCTAACACAGATACACAACCACGGGTCTTGAGATGGGGAGAAGGGTATTACAATGGAGGCATTAAGATCAAAAGGACAAATGAAACAATGGATGTCAATTCTGACCAAATAGGCTTGCAGAGGAGTGAGCAGCTTCGAAAGCTATATGCATCTCTCAAAAGTGCAGAAGTCAACTCACAAACGCAAAGACCTTCTGCTGTAATATCCCCTGAAGATCTCACAGATGCCGAGTGGTTTTACTTGGTTTGCATGTCCTTTGAATTCAACATTGGCCAAGGATTACCAGGAAGAGCTTTAGCAAATGGCAAACCGATTTGGCTGTGCAATGCCCTTTCTGCTGATAGTAGAGTTTTTAGTCGTTCTCTCTTTGCAAAGAGTGCATCCATTCAGACAGTGGTGTGCTTTCCTTTTCTGGAAGGGGTCATGGAGCTAGGCACAATTGATTTTGTCTCAGAAGACCACAGTCTCATTCAATGGATCAGAAGTTCTTTCTTGGATATTCTAGATACCAGTGTTCCTGAAAGGTCGGGAGCTACTTTCAGTGCAAGAAATGACGAAGGTTTTGCTTGTGTAGCATTCAATCGTAATGCATTACAAGCCAATCGACCAGCACAAACATTCACTGCTAAAGGGACAATTGGTGGTGGCGCTTCTCAAGTGCAAAGCTGGCAAGTTTTGGGTGATGAATTGAGCAACTGTGGCCAAAACTCCATGAGTTCTAGTGGCTCTATATCTCAAGCTTTTGACAATCCTGACAAGATTACTTTTGTTACCAAGAGTGAAAATCCAACCAGCTACTGTGCAGAAGACCTTCAAGAAAGCAATGGCCCAAAAACAACTTCAGTGGATCTTCCCAGTGATGATCAACATTATCAGAGACTTCTTTCAGCCCTTCTAAAACACTCAGACCAGTTAAATATGGGGTTGCATTTTCAAAATGTTCACAGGGAATCAAGCTTTGTCATTTGGAACAGACAAGGATCAATGGATTGTCAAAGACCAAGAAGAGGAATACCACAGAAATTATTGAAGAAGGCATTGTTTGAAGTTCCTAGGATGCACGTGGATTGGCTACTTGAGGCTCAAGAAGAGAGAGATTATAGAGAGGGAATGAGACCGGAGGTAGATGAAATTGGCATGAACCACGTCCTTTCAGAAAGAAAGAGAAGAGCAGAACTAAATGAAAGGTTTTCAACTCTTAGATCAATGGTCCCTTCAACTACTAAGGATGACAAAATTTCAATACTAGATGATGCCATAAATTACCTAAGAAAGCTTGAGAAAAAGGTAAGGGAGTTGGAAGCTCAAAGGGTGCTAATAGATTTAGAAGCTAGAACTAAAAGAACACCACAAGATATGGTGGAAAGGACTTCTGATAATTACTGTAACAACAAATTTGATAGTAAAAAGAAGTCAGTGGTAAACAAGAGGAAGGCTTCTGACATTGATGAGAAAAGGCGAGGGATCAGTTCAAAAGCTCTTAAAAAAGCTTCAGCTAGTAATGTTACTATCTGCATGAGAGACAATGAAATTCTGATTGAAATGAATTGCCTTTGGAGAGAAAGAGTGTTGTTGAAAATTATGGAAGCAATCAATAGCCTTTGTTTAGATTGTCATTCGGTTCAATCATCAGAAGCTGATGGGAATCTTAATCTGACCATTAAATCTAAGTTTAGAGGACCAAATGTTGCATCAGCAAAAAGGATCAAACACACACTCCAAAAAGCGGCTTTGAAATGTTGA 1818 0.4026 MLAENLKKQLALAVKSINWNYAIFWSNTDTQPRVLRWGEGYYNGGIKIKRTNETMDVNSDQIGLQRSEQLRKLYASLKSAEVNSQTQRPSAVISPEDLTDAEWFYLVCMSFEFNIGQGLPGRALANGKPIWLCNALSADSRVFSRSLFAKSASIQTVVCFPFLEGVMELGTIDFVSEDHSLIQWIRSSFLDILDTSVPERSGATFSARNDEGFACVAFNRNALQANRPAQTFTAKGTIGGGASQVQSWQVLGDELSNCGQNSMSSSGSISQAFDNPDKITFVTKSENPTSYCAEDLQESNGPKTTSVDLPSDDQHYQRLLSALLKHSDQLNMGLHFQNVHRESSFVIWNRQGSMDCQRPRRGIPQKLLKKALFEVPRMHVDWLLEAQEERDYREGMRPEVDEIGMNHVLSERKRRAELNERFSTLRSMVPSTTKDDKISILDDAINYLRKLEKKVRELEAQRVLIDLEARTKRTPQDMVERTSDNYCNNKFDSKKKSVVNKRKASDIDEKRRGISSKALKKASASNVTICMRDNEILIEMNCLWRERVLLKIMEAINSLCLDCHSVQSSEADGNLNLTIKSKFRGPNVASAKRIKHTLQKAALKC* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0591 605 Pfam Helix-loop-helix DNA-binding domain 406 452 IPR011598 GO:0046983
Apr7g0591 605 PANTHER TRANSCRIPTION FACTOR EGL1 4 601 - -
Apr7g0591 605 SMART finulus 408 457 IPR011598 GO:0046983
Apr7g0591 605 Gene3D - 105 180 IPR029016 -
Apr7g0591 605 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 405 462 IPR036638 GO:0046983
Apr7g0591 605 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 189 IPR025610 -
Apr7g0591 605 PANTHER TRANSCRIPTION FACTOR TT8 4 601 - -
Apr7g0591 605 Coils Coil 441 468 - -
Apr7g0591 605 Gene3D - 401 467 IPR036638 GO:0046983
Apr7g0591 605 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 402 451 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0591 Apr-Chr7 12441835 12444518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0591 2 605 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 43.800 2.05e-158 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g0591 bHLH-MYC_N 6.8e-50 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0591 - - gmx:100808167 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0591 7 12441835 12444518 Apr7g0591 7 12441835 12444518 ECH