Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0588 ATGCCAAATGTGAATTTGCACCCCAAGTTGGTAGATATTTCCTGTCATTTCTGTGTGTTTTTTGTGAGATTTCTCAAAGAGATGCCATTGTGGTGGGGAAAGTCTTCATCCAAAGAGGGAAAGAGGAAAGAAAATAGGGAAAGTATTATTGATGCAATACAAAGGAAATTAAATAAATCAAGAGGGTCTAGGAGACATTGTGGTGACACTATATCACAGAAGAGATCTAAGTCCCTTGTTCCTTCAAGATCACCATCACCCTCAACACATGTCTCCCGCTGTCAAAGTTTTGCAGAAAGGCCTGAAGCTCAGCCACTCCCACTCCCCAGGATGCACCTTCCCTCCATCAATCAAGCAAATTCTGGAATTAATGCAACATCAAAACTGGAAAACACCAGAGGCTCAAAGCCATCTCTATATTTCCCCCTACCAAAACCTGGTCATGTTTCTAACAGGGGAGAACCTACAGATGCTGAGGAAGATATAGCCACTGCATCAGTTTCTAGTGACAGCTCTATTTATAGTGATGATGACCAATGTGACTCACATTTCCTTAGTCCTCTGGCATCTGACTGTGAAAATGGAAACAGAGCTATTGTTCACAGTACAACCAGGGTGGTGCATAAAGATCAATCAGATATTACTGTCCAAAAAAGCTCAAGAGTATCCTCAAAACCGGCTCTTCAATTGTGCAATCATCAACTTCTATCTAACACATTCAAAGGGGCTTTGCATCTGCCAAATCTGCAAATGGCTTGTTCAGGTGGTTTATGGAGTGCTCCAGATAGTTCAATGTCAAGTCCTTCTAAAAGTCCACAGAGAACATTTGGTTCTGAGCAAGATTTGAACCCTGGATTCTGTACAGGAAAGTTGTATCCAGATATAGCTTCTGGGCACTGCTCTAGTCCAGGTTCAGGCCATAATTCTGGGCATAATTCAGTTGGTGGGGATTTGTCAGTGCAGATATGTTGGCCACAGAGCAGATGCAGCCCTGAGTGTTCTCCAATACCCAGTCCTGGAATGACAAGCCCTGGTTTCAGTTCCAGGATACACAGTGGTGCTGTCACCCCTCTTCATCCACAAGCTGGAGGTGCTGCAACAGAATCACCCACAAGACGTCGTGATGATGTAAAACAACAGACTCACCGATTACCACTTCCTTCATTAACAATCACTAAATCATGTCCATTTTCTCCAACTGCAACTACTACTCCTTCAGCACCTCGTAGTCCTGGTATAGCAGAAAATCTACCAAGCCCTGGTTCATGCTGGAAAAAGGGACAACTGCTTGGACAGGGGACATTTGGGCATGTATATCTTGGTTTTAACAGTGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACTCTTTTTTCAGATGATGCTAAATCAAGGGAAAGTGCTCAACAACTTGGCCAAGAAATTGCATTGCTAAGTCGCTTAAGGCATCCAAATATAGTCCAATATTATGGATCTGAGACGGTAGATGACAAACTTTACATATACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGTTGCTTCAACAATATGGCCAGCTTGGTGAAATTGCTATTCGTAATTATACTCGGCAAATTTTGTTAGGTCTTGCATATTTACATGCTAAGAACACTGTCCATAGAGACATTAAAGGAGCAAACATATTGGTGGATCCTAATGGGAGGGTAAAATTGGCAGATTTTGGTATGGCAAAGCATATAAGCGGGCAGTCCTGTCCATTATCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTATAAAAAATTCTAATGGTTGTAATCTTGCTGTTGATATATGGAGCCTTGGCTGCACTGTTTTGGAGATGGCGACAACAAAACCACCTTGGAGTCAATATGAAGGGGTTGCAGCTATGTTTAAGATTGGAAACAGCAAGGAACTTCCTGCAATCCCAGATCATCTATCAGAAGAAGGAAAAGATTTTGTCAAGCTTTGCTTGCAAAGGAATCCACTACATCGTCCCTCTGCTGCTCAACTTCTTCTGCATCCATTTGTTAGAAAAGCCACACCGGAAAGACCCTTTCTGTCTGCTGATCCTTCAGAAGCTAAACCTGCTTTTGTAAATGCTTTGAGATCTCTGGCCATTGGACCTACAAAACATAATTTATGCTTAGATTCAGTAGCGGCTAGCATACATTTGTCAAGAAGCTCAAGAGCTGGTTCAGGAACAAGCAATGCCCATACACCAAGGAACATCTCTCGTCCTGTGTCTCCTACTGGGAGCCCACTTTTTCCATCTAGATCACAGCATGAGTGGAAGGATGTCTCCATCTCCTATATCTAG 2328 0.4274 MPNVNLHPKLVDISCHFCVFFVRFLKEMPLWWGKSSSKEGKRKENRESIIDAIQRKLNKSRGSRRHCGDTISQKRSKSLVPSRSPSPSTHVSRCQSFAERPEAQPLPLPRMHLPSINQANSGINATSKLENTRGSKPSLYFPLPKPGHVSNRGEPTDAEEDIATASVSSDSSIYSDDDQCDSHFLSPLASDCENGNRAIVHSTTRVVHKDQSDITVQKSSRVSSKPALQLCNHQLLSNTFKGALHLPNLQMACSGGLWSAPDSSMSSPSKSPQRTFGSEQDLNPGFCTGKLYPDIASGHCSSPGSGHNSGHNSVGGDLSVQICWPQSRCSPECSPIPSPGMTSPGFSSRIHSGAVTPLHPQAGGAATESPTRRRDDVKQQTHRLPLPSLTITKSCPFSPTATTTPSAPRSPGIAENLPSPGSCWKKGQLLGQGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSRESAQQLGQEIALLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQQYGQLGEIAIRNYTRQILLGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHISGQSCPLSFKGSPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPAIPDHLSEEGKDFVKLCLQRNPLHRPSAAQLLLHPFVRKATPERPFLSADPSEAKPAFVNALRSLAIGPTKHNLCLDSVAASIHLSRSSRAGSGTSNAHTPRNISRPVSPTGSPLFPSRSQHEWKDVSISYI* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0588 775 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 28 771 - -
Apr7g0588 775 MobiDBLite consensus disorder prediction 57 157 - -
Apr7g0588 775 MobiDBLite consensus disorder prediction 114 134 - -
Apr7g0588 775 MobiDBLite consensus disorder prediction 730 762 - -
Apr7g0588 775 MobiDBLite consensus disorder prediction 73 95 - -
Apr7g0588 775 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 28 771 - -
Apr7g0588 775 ProSitePatterns Protein kinases ATP-binding region signature. 430 453 IPR017441 GO:0005524
Apr7g0588 775 Pfam Protein kinase domain 425 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0588 775 MobiDBLite consensus disorder prediction 57 72 - -
Apr7g0588 775 MobiDBLite consensus disorder prediction 260 282 - -
Apr7g0588 775 SMART serkin_6 424 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0588 775 CDD STKc_MEKK1_plant 424 680 - -
Apr7g0588 775 Gene3D Transferase(Phosphotransferase) domain 1 423 701 - -
Apr7g0588 775 ProSiteProfiles Protein kinase domain profile. 424 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0588 775 MobiDBLite consensus disorder prediction 383 410 - -
Apr7g0588 775 MobiDBLite consensus disorder prediction 340 418 - -
Apr7g0588 775 SUPERFAMILY Protein kinase-like (PK-like) 423 753 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0588 Apr-Chr7 12421114 12427985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0588 28 765 MAP Kinase Kinase Kinase AT1G63700 63.937 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Apr7g0588 Pkinase 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0588 K20717 - gmx:100777350 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0588 7 12421114 12427985 Apr7g0588 7 12421114 12427985 ECH