Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0585 ATGTCTTCTCATCTCTATGCTTTAGATATTTCTTTCCACACACTTTCAAGCCCTGACTATGATGATGGCAGTGGACAACTTGTGTTTTTCTCTGATCCATTTCTCACCACTTCTCCCATTGATGTACCTCTAGGGAGTTTCGACAATTCTCTGAACCCCTTTTCTTTTTCTCCTCCCGAAAACAAATTGCTCTACCAGACTAATCACTCAAGTGGCTCAAATATAAAGGGTGAGTCTAGAAATTTTGCTGCTTTTGATGGCCCTGAAGTGATAAGTGAGGAATGCCAAATGGGTGTGGATTACACCTTCAATCAGCACATTATTTCTCAAAGTGGCAGCATGCAAAGGAGCTTCAGCTGTAACTCTTTTGATGGGAAACCTAGTTTCCCCACTCTCATGGACTTCCCAAATTTTCAATGGCATGCTTTGAACTCTCCTGAGAACACTTTCGTCAGTGGAGAAATGAGGAGGGTGTGCAGCACAGGAGATTTGCAGAACATGAAAGCCACGGATATGTCTCACACGGAGAGCCCCTTTTTGGAGGAAGCAAACTTCAAAGTAGGGCGTTACAGTGCCGAAGAAAGAAAAGAAAGAATCTCAAAATATAGAGCCAAGAGAAGCCAGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACACTAGCCGACAATCGAACACGCATACGTGGCAGATTCGCACGTAACGACGACACCATCGAGATTCCAATTCCGAAAGCCCCATGTGCAACCACAGAAGAATATGAAGACGAGTTCTGGGTTGAATTCATTGATGGGTTAAATGACGAGCCTCTGGGTTAG 825 0.4376 MSSHLYALDISFHTLSSPDYDDGSGQLVFFSDPFLTTSPIDVPLGSFDNSLNPFSFSPPENKLLYQTNHSSGSNIKGESRNFAAFDGPEVISEECQMGVDYTFNQHIISQSGSMQRSFSCNSFDGKPSFPTLMDFPNFQWHALNSPENTFVSGEMRRVCSTGDLQNMKATDMSHTESPFLEEANFKVGRYSAEERKERISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDDTIEIPIPKAPCATTEEYEDEFWVEFIDGLNDEPLG* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0585 274 PANTHER CCT MOTIF FAMILY PROTEIN 53 271 - -
Apr7g0585 274 Pfam CCT motif 195 237 IPR010402 GO:0005515
Apr7g0585 274 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 53 271 IPR045281 GO:0009909
Apr7g0585 274 ProSiteProfiles CCT domain profile. 195 237 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0585 Apr-Chr7 12381925 12383162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0585 191 242 C2C2-CO-like Transcription Factor Family AT5G24930 51.923 1.22e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr7g0585 CCT 1.7e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0585 - - gmx:100786853 351.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0585 7 12381925 12383162 Apr7g0585 7 12381925 12383162 ECH
Apr7g0585 7 12381925 12383162 Apr2g1219 2 18408158 18410274 PCT