Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0579 ATGGCTCGACAACTGTGTGAAGACAAATCATCAGGTGGATTCTGCTATTCTGATGCATCATCGGGTAACCCAACGATGCAGACTCATCTAGTGAACCAGATCCAAGGCTTTGTGTCAGACCCAGAGATGTTCAACCTCACCACAGGCATGGAAATGATAGGGTTTCCAAAGGGCGACGCCAACGCTGTCATGTGGAAAACTTTCAGCGCCAAACCTGGTCCTTCCTCTTCCAAAACCATGAATCACTCTTCCACCACTTTCTACCACCATGACTATAACAACAAGCCTTCAGATTTCACACAAGCGATATCTGAAACAAGTGGCGAGAATCTAATCGTGGGAGCTCACGATTCAGCTCCGTGGCAAGAGAACAACAACAGGTTACTCGTTGATGATTCTTCCTTAAGGTGTGTGTTCCCTTGTGAAGGGAACGAAAGGCCTAGTCAAGGTCTTTCACTCTCTCTTAGTTCAACCAACCCTTCCACTATTGGGTTGCAATCTTTTGAGCTAAGACAAACAAGCCACCATCCTGATTTTGTTTCAACTTCCAGAGAGGGGTTCTTTGGAAAATCAGTGACTGTTCAACAGCAACAGGTGTTACAAGATGGGTATTTGAGTGCTAAGCCTGCGAATCTTTATCAACAAGGACATTTCTTGCTCAAGAACTCAAAGTACCTGGTACCTGCACAGGACCTTCTGAACGAGTTTTGTAGTCTAGGCACAAAGCAAAGCGAAGTGCCAAAGCCAAAGTCGTCAAACAAGAACAAGCAGTGGGAAGAGGATAATAATAACGGTGTCGGTTCCTCGAAGAAGCATTCTCTTACCTCCCTAGAATTCGTGGAATTGCAAAAGAGAAAGACAAAGCTGCTTTCGATGCTGGAAGAGGTTGACAGAAGATACAAGCACTACCGCAATCAGATGAAAAGCGTGGTGTCATCGTTTGAAGCTGTGGCTGGGAATGGTGCAGCCACGGTGTACTCGGCGTTGGCTTTGAAAGCCATGTCGAGACATTTCAGATGTTTGAAGGATGGGATATTGGGGCAGATTCAGGCCACAAGGAAAGCCATGGGAGAGAAAGACCCAGTTGCACCAGGCACAACAAGGGGTGAAACACCAAGGCTTAAAATCATTGACCAAGCCCTCAGACAACAAAGAGCCTTCCAACAAATGAGCATGATGGAAACGCATCCTTGGAGACCCCAACGTGGCCTTCCCGAGCGATCTGTCTCCGTTCTTCGAGCTTGGCTTTTTGAGCATTTTCTCCATCCGTATCCAAGCGATGTTGACAAACATATTTTAGCCCGCCAAACTGGTCTCTCGAGAAGTCAGGTTTCAAATTGGTTTATCAATGCAAGGGTGAGACTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGCTGAAGGATCAGGAAAACAATATAGCTTCCTCAGAGGCGGGCACCGATCCAGATGATAATATTAACCCAAATGTTCAAAACCCACCACCTGCTTCTTCACGTTCCGAGGATCAGAAGCCGACACTTGTCCGAATTGACTCTGAGTGTGCGTCCTCCGTCATCAACAACCACACCCCAGATAACAAAAACGACCCAAAGAACAGCACCAACATGAACCCACAAGAACAATGCTTTGGGTCGGTGGAGCTTGATTTTTCATCTTACACGCACCACACATCGGGCATGGTTTCTTACAGTAGTAACGATCATGATGGGAACAACCAGAGTTTGAATGGTGGGAATGGGGTGTCTTTGACGCTAGGGCTACAGCAGCATGGGGTGAGCCTAGCGTTCCCGCCAACAACTCAGAGTTCGCTGTACTATCCAAGGGACCAAATTGAAGATTGTCAACCAGTTCAGTACTCTCTTTTGGACGGCGAAGGACAAAACCTGCCTTATAGAAATTTGATGGGTGCACAACTGCTTCATGATTTGGCAGGATGA 1944 0.4686 MARQLCEDKSSGGFCYSDASSGNPTMQTHLVNQIQGFVSDPEMFNLTTGMEMIGFPKGDANAVMWKTFSAKPGPSSSKTMNHSSTTFYHHDYNNKPSDFTQAISETSGENLIVGAHDSAPWQENNNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSTIGLQSFELRQTSHHPDFVSTSREGFFGKSVTVQQQQVLQDGYLSAKPANLYQQGHFLLKNSKYLVPAQDLLNEFCSLGTKQSEVPKPKSSNKNKQWEEDNNNGVGSSKKHSLTSLEFVELQKRKTKLLSMLEEVDRRYKHYRNQMKSVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGILGQIQATRKAMGEKDPVAPGTTRGETPRLKIIDQALRQQRAFQQMSMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEELKDQENNIASSEAGTDPDDNINPNVQNPPPASSRSEDQKPTLVRIDSECASSVINNHTPDNKNDPKNSTNMNPQEQCFGSVELDFSSYTHHTSGMVSYSSNDHDGNNQSLNGGNGVSLTLGLQQHGVSLAFPPTTQSSLYYPRDQIEDCQPVQYSLLDGEGQNLPYRNLMGAQLLHDLAG* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0579 647 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 9 606 - -
Apr7g0579 647 MobiDBLite consensus disorder prediction 243 270 - -
Apr7g0579 647 ProSiteProfiles 'Homeobox' domain profile. 395 458 IPR001356 GO:0003677
Apr7g0579 647 SMART HOX_1 398 462 IPR001356 GO:0003677
Apr7g0579 647 SMART prehox3 214 347 IPR006563 -
Apr7g0579 647 CDD homeodomain 398 459 IPR001356 GO:0003677
Apr7g0579 647 Gene3D - 401 463 - -
Apr7g0579 647 Pfam Homeobox KN domain 415 454 IPR008422 GO:0003677|GO:0006355
Apr7g0579 647 MobiDBLite consensus disorder prediction 476 507 - -
Apr7g0579 647 MobiDBLite consensus disorder prediction 519 542 - -
Apr7g0579 647 SUPERFAMILY Homeodomain-like 399 464 IPR009057 -
Apr7g0579 647 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 9 606 - -
Apr7g0579 647 Pfam Associated with HOX 220 345 IPR006563 -
Apr7g0579 647 MobiDBLite consensus disorder prediction 476 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0579 Apr-Chr7 12285271 12290586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0579 89 646 Homeobox Transcription Factor Family AT5G41410 45.367 1.00e-140 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Apr7g0579 POX 2.2e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0579 - - gmx:100803088 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0579 7 12285271 12290586 Apr7g0579 7 12285271 12290586 ECH
Apr7g0579 7 12285271 12290586 Apr2g1224 2 18453773 18458335 PCT
Apr9g3124 9 38045769 38053710 Apr7g0579 7 12285271 12290586 PCT