Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0574 ATGGGTAGCAAAGAGAAAGAGTCATTAAAGAGGGTTCATACTCATGGAGGTAGATACGTGCAATACAATGTTTATGGAAACTTGTTCGAGGTCTCTTCCAAGTACGTTCCTCCCATTCGCCCTATCGGAAGAGGCGCATACGGCATCGTTTGTTCTGCCGTTAATTCCGATACGCACGAGGAAGTTGCCATAAAGAAGATTGGTAACGCGTTTGACAACATCATTGACGCTAAACGGACTTTGAGGGAAATTAAACTCCTTCGCCACTTGGACCATGAAAATATCATTGCCATTAAGGATATCATACGACCTCCCAGAAAGGATACCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATAATTCGTTCTGACCAACCACTTAACGGTGACCATTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCAGCCAATGTCTTGCACCGCGATCTTAAACCTAGTAATTTACTTTTGAATTCGAATTGTGACCTGAAAATTGGGGACTTTGGTTTGGCGAGGACGACGTCTGAGGCAGATTTCATGACAGAGTATGTTGTCACTCGATGGTACCGAGCCCCCGAGTTGCTCCTTAATTGTTCAGAGTACACCTCTGCCATTGATGTTTGGTCTGTTGGATGCATATTTGGGGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAAGGCTTATAACGGAGTTAATAGGTTCACCTGACGATGCCAGCCTTGGATTTCTGCGAAGTGAAAATGCAAGAAGATATGTTAGACAGCTTCCACAATACAGGAAGCAAAATTTCTCTGCCAGATTCCCAAATATGTCTCCTGAGGCATTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAGGCGCATTACAGTTGATGAAGCACTATGTCACCCATATCTTTCCTCACTTCATGATATCAATGATGAACCAGTTGGTTCTACGCCATTCAGTTTTGATTTTGAGCAGCCAACATGCACTGGAGAGCACATCAAGGAGCTCATCTGGAGGGAATCGGTGAAGTACAATCCAGATTTACCCGGACAGTAA 1113 0.4277 MGSKEKESLKRVHTHGGRYVQYNVYGNLFEVSSKYVPPIRPIGRGAYGIVCSAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHLDHENIIAIKDIIRPPRKDTFNDVYIVYELMDTDLHQIIRSDQPLNGDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNSNCDLKIGDFGLARTTSEADFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYVRQLPQYRKQNFSARFPNMSPEALDLLEKMLIFDPNRRITVDEALCHPYLSSLHDINDEPVGSTPFSFDFEQPTCTGEHIKELIWRESVKYNPDLPGQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0574 370 SUPERFAMILY Protein kinase-like (PK-like) 39 330 IPR011009 -
Apr7g0574 370 SMART serkin_6 36 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0574 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 368 - -
Apr7g0574 370 Gene3D Transferase(Phosphotransferase) domain 1 120 349 - -
Apr7g0574 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Apr7g0574 370 Pfam Protein kinase domain 40 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0574 370 Gene3D Phosphorylase Kinase; domain 1 19 359 - -
Apr7g0574 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 13 368 - -
Apr7g0574 370 CDD STKc_TEY_MAPK 29 365 - -
Apr7g0574 370 ProSiteProfiles Protein kinase domain profile. 36 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0574 370 ProSitePatterns Protein kinases ATP-binding region signature. 42 66 IPR017441 GO:0005524
Apr7g0574 370 ProSitePatterns MAP kinase signature. 71 174 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0574 Apr-Chr7 12231992 12235204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0574 2 365 MAP Kinase Gene Family AT4G01370 83.516 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Apr7g0574 Pkinase 4.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0574 - - gmx:100803024 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0574 7 12231992 12235204 Apr7g0574 7 12231992 12235204 ECH
Apr7g0574 7 12231992 12235204 Apr2g1228 2 18501957 18506222 PCT