Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0573 ATGATCATTCCAGAGAAGAACCGTCGAGAGATCTGCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCAAAGAAGGATTTCAATCTGGCGAAGCACCCAGAGATTGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGTTTCAAGTCTAGGGAGTATGTGAGGGAGACATTTGCGTGGATGCACTATTACTGGTTCCTCACCAATGATGGAATTGAGTTCCTCAGGACTTACCTCAATCTTCCCTCAGAAATTGTGCCAGCCACACTGAAGAAGCAAGCCAAGCCCGCTGGTAGACCATTCGGTGGCCCACCCGGTGATCGCCCTAGGGGCCCACCTCGCTTTGAGGGAGAGAGGAGATTCGGTGATCGTGATGGGTACCGTGGAGGTCCTCGGGGACCTGGTGGTGACTTTGGAGACAAGGGTGGAGCTCCTGCTGACTACAGGCCTTCTTTTGGGGGTCCTGGTGGAAGGCCTGGCTTTGGTCGCGGTTCTGGTGGTTATGGAGCACCAACCAGTTCAAACATTCCCTAA 537 0.5251 MIIPEKNRREICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGDKGGAPADYRPSFGGPGGRPGFGRGSGGYGAPTSSNIP* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0573 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 177 IPR037447 -
Apr7g0573 178 MobiDBLite consensus disorder prediction 91 178 - -
Apr7g0573 178 Gene3D - 1 104 IPR036388 -
Apr7g0573 178 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 177 - -
Apr7g0573 178 MobiDBLite consensus disorder prediction 112 128 - -
Apr7g0573 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0573 Apr-Chr7 12205625 12207624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0573 1 178 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.978 2.73e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0573 K02947 K09422 gmx:100797787 246.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0573 7 12205625 12207624 Apr7g0573 7 12205625 12207624 ECH