Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0566 ATGCCCCCTTTTGACTTGTACACTCAGTCAACTCGATTAAACGCTGTTGAATTCTCAGAAACCACAACAGTGGTTGATGAATTGGAAGAGTTTTACAAACCTTTACACCCCCCTCACCCTATTCTCAACAACCCTCTTCCCATCGTTACAAATTCCCTGCCTATCCCCCATGAAACCGAACAAGAAGTCAAAGAACTCAAACCATCAAAAGAAGTAGCAACACAAGATTTGCGAGATCCCCCACCATCTAAATGTGAAAAAAGCAAGAAGAAGCAGAAGAACAAGAGGGTGAAACACGTGTTGACAGCAGCAGATGGGGTCTCGGACCAATGGGCATGGCGTAAATATGGGCAGAAACCAATAAAAGGATCAACCTATCCCCGTAGCTATTATAGATGCAGCAGTTCCAAAGGGTGTTTGGCTAGGAAACAGGTGGAACGAAGCCATTTGGATCCTGGAGTTTTCATAGTTACCTACACCGCAGAACACAGCGATCCTCACCCACCTCGCAAAAGCTCGCGAGCTCGGAACACCCGAAAGAACACTTCCACAGTTGCCCCTCCAATAACTCATGATCAAGACACTTTCTCTCCACGGACACCTGAGACGGCGGAGTCCATTGAAGATGAGCATGCGCCAAGTGTTGAACGTGAACGAAGTAAGGGTCTTAAGAAAGAGAAGGATTTTGTAGGTGATAGTTGA 702 0.463 MPPFDLYTQSTRLNAVEFSETTTVVDELEEFYKPLHPPHPILNNPLPIVTNSLPIPHETEQEVKELKPSKEVATQDLRDPPPSKCEKSKKKQKNKRVKHVLTAADGVSDQWAWRKYGQKPIKGSTYPRSYYRCSSSKGCLARKQVERSHLDPGVFIVTYTAEHSDPHPPRKSSRARNTRKNTSTVAPPITHDQDTFSPRTPETAESIEDEHAPSVERERSKGLKKEKDFVGDS* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0566 233 ProSiteProfiles WRKY domain profile. 102 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g0566 233 SUPERFAMILY WRKY DNA-binding domain 103 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g0566 233 SMART WRKY_cls 107 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g0566 233 Pfam WRKY DNA -binding domain 109 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g0566 233 MobiDBLite consensus disorder prediction 160 233 - -
Apr7g0566 233 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 14 220 - -
Apr7g0566 233 MobiDBLite consensus disorder prediction 178 202 - -
Apr7g0566 233 Gene3D WRKY domain 88 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g0566 233 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 220 IPR044810 GO:0003700
Apr7g0566 233 MobiDBLite consensus disorder prediction 62 98 - -
Apr7g0566 233 MobiDBLite consensus disorder prediction 203 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0566 Apr-Chr7 12109359 12110557 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0566 87 187 WRKY Transcription Factor Family AT5G52830 61.386 7.60e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr7g0566 WRKY 1.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0566 K13426 - gmx:102667019 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0566 7 12109359 12110557 Apr2g1236 2 18598087 18599336 PCT