Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0555 ATGGAACAAAAGAGCATTTTGTTATCGGCGCTGAGTGTTGGGGTGGGAGTGGGAGTGGGGATTGGCTTGGCTTCTACACAAAACGTTAACAAATGTGGAGTTAACAATAATTCATCATCAAACGCTATTTCTCCAGAGAAGATGGAGCACGAAATGCTACGACTAGTTGTCGATGGCAGAGAAAGCAATGTCACTTTTGATCAATTCCCTTATTATCTTAGCGAGCAGACACGGGAGTTGTTGACAAGTGCTGCCTACGTGCATTTAAAGCATGCAGAGATTTCAAGATATACACGGAATCTTGCTCCTGCAAGCCGAACTATTCTACTCTCGGGACCTGCAGAACTTTACCAGCAAGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCGAAGTTACTTCTGTTAGATTTAACTGACTTTTCGTTGAAGATTCAAAGTAAATATGGTTCTCCGAACAAAGAATCTTCTTTCAAAAGGTCTACTTCAGAGTTAACTTTGAATCGGATAACTGACATGTTTGGGTCATTTTCGATCTTTCCACAGAGAGAAAGGCCCAAAGGGAAAATTCGCAGGCAAAGCTATGGAGAGGACCTCCAATTAATGGAGGCTGAAGGATCTTGCAATCCTCCAAAGTTTCGGAGGAATGCATCTGCCTCTGCAAATATCAGTAGTCTTGCTTTGCAAAGCAATCCTGCAAATTTAGCTTCTCATAAACATGCAACCAGTTGGCCTTTTGACGAAAAGCTTCTGATACAGACTCTTTACAAGGTTCTAGTTTTTGTGTCAAAAACTTATCCCATTGTGCTATATCTGCGAGATGTTGACAAATTGTTGCATAGATCACAAAGAATATATAAACTATTTCAGAATATGTTGAATAAATTATCTGGACCAATTTTAATTCTTGGTTCACGAGTTTTGGATACCGATAGTGACTACAAAGATGTTGATGAGAGACTTATTTCCTTCTTCCCCTACAAAATAGAAATCAGGCCCCCAGAAGACGAATCTCAACTTATCAGTTGGAAGTCTCAATTTGAAGCGGAGATGAAGATGATACAGATTCAGGATAATAGGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGAATTAGATTCCATTTGTGTAGCAGATACAATGGTTCTCAGTAACTATATAGAAGAGATTATCGTGTCAGCGATTTCTTATCATTTAATGAATAACAAAGATCCTGAATACAGAAATGGGAAGCTAGTTATTCCATGCAATGGTTTGTCCCATGCATTGGGTATATTTCAGGAGGGGAAATTCAATGGAAGAGATACATTAAAATTAGAAGCTCAAGCAATAACATCTGAGAGAGAAGAAGGAGCTGTTGTGAACCCAGAAGGAAAGTCAGACAATTTTGCTCCTGATAAAAAGGCTGAAGCAGATTCATCAACTTCAGTGGGAAAATCTGACGGTGAAAATTCAGTTCCTGCATCCAAAGTTGAAGTTCCCCCTGATAATGAGTTTGAGAAGCGTATAAGGCCTGAGGTAATACCAGCAAACGAGCTAAGTGTAACGTTCTCCGATATTGGTGCCTTAGATGAGACCAAAGAATCACTTCAAGAACTTGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTTATTGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCTCCTGGCACTGGGAAGACAATGCTGGCAAAGGCCATTGCAAAAGAGGCTGGAGCAAGTTTCATCAATGTATCCATGTCTACCATTACTTCTAAATGGTTTGGTGAAGATGAAAAGAATATTCGTGCTTTATTCACACTGGCAGCTAAGGTATCCCCAACTATTATATTTGTTGATGAGGTTGATAGTATGTTGGGACAACGAACTAGAGTTGGGGAGCATGAAGCCATGAGAAAAATGAAGAATGAATTTATGACCCATTGGGATGGCCTAGTGACAAATCCAGAGGAGAGAATACTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTGGATGAGGCTATTATTAGGAGATTTGAAAGGAGATTTATGGTAGGGTTGCCATCTGCGCAAAATAGGGAAAAGATTTTGATGACTCTTTTGGCGAAAGAGAAGGTGGATGAGAAACTTGATTTTAAGGAACTCGCAATAATGACAGACGGATATAGTGGAAGTGATCTCAAGAACTTGTGCACAACTGCTGCTTACAGGCCGGTTAGAGAGTTAATTAAGCAAGAGAGAGTAAAGAATCTGGAGAAAAAGCGAAAAAACATTGAAGGACAGAGAAATACCCAAGCTGCTGTGGATGCAGAAGAAGTTCAACAAGAAAGAGTTATTACCCTTAGACCTTTGAACATGCGGGACTTCAAAGAAGCAAAGAAACTGGTTGCCACAAGCTACGCAGCTGAAGGGTATGGAATGAGTGAGCTGAAGCAATGGAATGATTTGTACGGCGAAGGCGGTTCAAGAAAGCAAGAACAATTACCTCACTTCTTGTGA 2511 0.4058 MEQKSILLSALSVGVGVGVGIGLASTQNVNKCGVNNNSSSNAISPEKMEHEMLRLVVDGRESNVTFDQFPYYLSEQTRELLTSAAYVHLKHAEISRYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSKYGSPNKESSFKRSTSELTLNRITDMFGSFSIFPQRERPKGKIRRQSYGEDLQLMEAEGSCNPPKFRRNASASANISSLALQSNPANLASHKHATSWPFDEKLLIQTLYKVLVFVSKTYPIVLYLRDVDKLLHRSQRIYKLFQNMLNKLSGPILILGSRVLDTDSDYKDVDERLISFFPYKIEIRPPEDESQLISWKSQFEAEMKMIQIQDNRNHIMEVLAANDLDCDELDSICVADTMVLSNYIEEIIVSAISYHLMNNKDPEYRNGKLVIPCNGLSHALGIFQEGKFNGRDTLKLEAQAITSEREEGAVVNPEGKSDNFAPDKKAEADSSTSVGKSDGENSVPASKVEVPPDNEFEKRIRPEVIPANELSVTFSDIGALDETKESLQELVMLPLRRPDLFIGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNIRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKMKNEFMTHWDGLVTNPEERILVLAATNRPFDLDEAIIRRFERRFMVGLPSAQNREKILMTLLAKEKVDEKLDFKELAIMTDGYSGSDLKNLCTTAAYRPVRELIKQERVKNLEKKRKNIEGQRNTQAAVDAEEVQQERVITLRPLNMRDFKEAKKLVATSYAAEGYGMSELKQWNDLYGEGGSRKQEQLPHFL* 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0555 836 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 836 - -
Apr7g0555 836 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 836 - -
Apr7g0555 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 520 803 IPR027417 -
Apr7g0555 836 MobiDBLite consensus disorder prediction 452 499 - -
Apr7g0555 836 Gene3D - 519 691 IPR027417 -
Apr7g0555 836 CDD AAA 558 691 - -
Apr7g0555 836 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 355 IPR027417 -
Apr7g0555 836 SMART AAA_5 556 693 IPR003593 -
Apr7g0555 836 Pfam AAA+ lid domain 714 756 IPR041569 -
Apr7g0555 836 Gene3D - 50 356 IPR027417 -
Apr7g0555 836 ProSitePatterns AAA-protein family signature. 663 682 IPR003960 GO:0005524|GO:0016887
Apr7g0555 836 Pfam ATPase family associated with various cellular activities (AAA) 560 690 IPR003959 GO:0005524|GO:0016887
Apr7g0555 836 Gene3D - 692 762 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0555 Apr-Chr7 11974654 11981203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0555 520 752 Calmodulin-binding Proteins AT3G56690 37.288 8.97e-40 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0555 - - gmx:100808011 1333.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0555 7 11974654 11981203 Apr7g0555 7 11974654 11981203 ECH
Apr7g0555 7 11974654 11981203 Apr2g1245 2 18695839 18702014 PCT