Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0544 ATGGATTTTTTTGCACGCGTTTTGTGTTCAATCTACATTGTGGGTTTCGTGCTCTGGCTAGGAAATGCAGGACCCATTGAAGACAAGCGAGTTTTGCTTGACTTCATTGAAAAGTTTCCTCCCTCAAGGCCTCTCAACTGGAATGAGAGTTCTTCCCCGTGTACCACTTGGATTGGTGTCACTTGTAACGAAGATAAGTCACGGGTCATTGCCATTCGATTGCCAGGGTTTGGATTTCATGGCACCATTCCTTCGAATACAATAAGCCGCGTCACGGGCTTGCAAACGCTGAGTCTCAGATCCAACTTCATAACTGGGCATTTTCCTTCTGATTTTTCCAATCTCAAAAACCTTTCTTTTCTGTATCTTCAGTTCAACAATTTCACGGGGCCCTTGCCCGAATTCTCTGTTTGGAGGAACCTCTCTGTTCTCAACTTGTCCAATAATCGTTTCAGTGGCAGCATTCCTCTCTCGATTTCGAATTTGACACTGCTTGTTGCTTTGAATCTCTCAAACAACTCCCTCTCTGGTGAAATCCCTGATATTAAGTTGCCCCAGCTGCAGCAATTGAATTTGGCTAACAACAATTTGCACGGTGCTGTGCCCCTCTCCCTCCAGAGGTTTCCTGAGTCAGCATTTGTTGGAAACAACGTTTCCTCCCATGCAACTCTCCCCTCTTCAAAACCGGGTTCTGAATATGAGAAACATGGAAGGCTTGGTGAAACTGCGGTGCTGGGAGTTATCGTTGCCGGTGCTGTTCTTGGTCTTGCGGCATTCATTGTTTCTATCTGTGTGTGCTGCTTGAGAAGGAAAAAAGGAGATGCCTTTGTTGGGAAGTTGCAGAAGGGTGATATGTCTCCGGAAAGAGTAGTTTCAAGGGACCAGGATGCAAATAATAAACTTGTTTTCTTTGAGGATTGTAATTATGCCTTTGACTTGGAGGATTTGCTAAGGGCCTCTGCCGAGGTATTGGGGAAGGGAACGTTCGGTGCTGCATATAAGGCTGTCCTAGAGGACGCTACCACAGTTGTTGTGAAGAGGTTGAAAGTGGTAGCTGTTGGAAAGAAGGATTTTGAGCAGCACATGGATCTTATTGGAAGTCTTAAACATGAGAATGTGGTTCAGCTAAAGGGGTATTACTATTCCAAAGATGAGAAACTGATGGTGTATGATTACTACAGTCAGGGGAGCGTCTCCGCTTTGTTGCATGGTAAAAGAGGAGAGGATAGGGTCCCTTTAGATTGGGATACTCGGATGAAAATTGCTTTGGGTGCTGCTCGAGGCCTTGCCCATATCCATTCCGAGAATGGTGGGAAGCTTGTACATGGCAATATCAGATCCTCAAATATCTTTTTGAACACAGGACAGTGTGGTTGTGTATCCGATCTTGGCCTGGCAACCATAATGAGCTCAGTTGCCATACCCATCTCGCGAGCTGCTGGTTACCGAGCGCCTGAGGTTACATACACCAGGAAAGCAGCACAGCCTTCAGATGTTTACAGCTTTGGTGTGGTGTTACTAGAGCTTCTGACTGGGAAATCTCCGATCTACACAACTGGTGGTGATGAGATTGTCCACCTTGTGAGATGGGTTCATTCAGTTGTGAGGGAGGAGTGGACAGCTGAAGTATTTGACTTGGAGCTAATGCGATGTCCCAATATAGAGGAAGAGATGGTGGAAATGTTACAGGTAGCAATGTCATGTGTGGTAAGGGTGCCTGATCAAAGGCCTGAGATGTCAGATGTTGTAAAAATAATTGAAAATGTCAGGCAGATTGATGTGGGCAATCAGCAATCATCTGAGAACCAAGTTGAAAGTGCAACACAGCCCCCTTTAGCCACTTAG 1845 0.4575 MDFFARVLCSIYIVGFVLWLGNAGPIEDKRVLLDFIEKFPPSRPLNWNESSSPCTTWIGVTCNEDKSRVIAIRLPGFGFHGTIPSNTISRVTGLQTLSLRSNFITGHFPSDFSNLKNLSFLYLQFNNFTGPLPEFSVWRNLSVLNLSNNRFSGSIPLSISNLTLLVALNLSNNSLSGEIPDIKLPQLQQLNLANNNLHGAVPLSLQRFPESAFVGNNVSSHATLPSSKPGSEYEKHGRLGETAVLGVIVAGAVLGLAAFIVSICVCCLRRKKGDAFVGKLQKGDMSPERVVSRDQDANNKLVFFEDCNYAFDLEDLLRASAEVLGKGTFGAAYKAVLEDATTVVVKRLKVVAVGKKDFEQHMDLIGSLKHENVVQLKGYYYSKDEKLMVYDYYSQGSVSALLHGKRGEDRVPLDWDTRMKIALGAARGLAHIHSENGGKLVHGNIRSSNIFLNTGQCGCVSDLGLATIMSSVAIPISRAAGYRAPEVTYTRKAAQPSDVYSFGVVLLELLTGKSPIYTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRCPNIEEEMVEMLQVAMSCVVRVPDQRPEMSDVVKIIENVRQIDVGNQQSSENQVESATQPPLAT* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0544 614 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Apr7g0544 614 Gene3D Phosphorylase Kinase; domain 1 285 392 - -
Apr7g0544 614 PANTHER OS05G0588300 PROTEIN 22 600 - -
Apr7g0544 614 Gene3D Transferase(Phosphotransferase) domain 1 394 610 - -
Apr7g0544 614 SUPERFAMILY Protein kinase-like (PK-like) 322 590 IPR011009 -
Apr7g0544 614 Pfam Leucine Rich Repeat 94 115 IPR001611 GO:0005515
Apr7g0544 614 PANTHER PROTEIN, PUTATIVE-RELATED 22 600 - -
Apr7g0544 614 Gene3D Ribonuclease Inhibitor 28 136 IPR032675 -
Apr7g0544 614 Pfam Protein tyrosine and serine/threonine kinase 322 585 IPR001245 GO:0004672|GO:0006468
Apr7g0544 614 SUPERFAMILY L domain-like 38 207 - -
Apr7g0544 614 Gene3D Ribonuclease Inhibitor 137 228 IPR032675 -
Apr7g0544 614 ProSiteProfiles Protein kinase domain profile. 318 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0544 614 ProSitePatterns Protein kinases ATP-binding region signature. 324 355 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0544 Apr-Chr7 11869624 11872269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0544 17 600 Receptor kinase-like Gene Family AT4G23740 62.625 0.0 752
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr7g0544 PK_Tyr_Ser-Thr 2.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0544 - - gmx:100814524 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0544 7 11869624 11872269 Apr7g0544 7 11869624 11872269 ECH
Apr7g0544 7 11869624 11872269 Apr2g1256 2 18815486 18819327 PCT