Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0531 ATGTCCACAACCTCAACGACAAGCTCTCAAGAAGTGAGCAGTAATGAATGGGAGTTCATAGACATGAGCGAGCAAGAGGAGGATCTCATTCGCAGGATGTACGGGCTAGTTGGTGATAGGTGGAATTTGATAGCTGGTCGCATTCCAGGTCGAAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACACGGCGATGCTTTCTCTGTTAAAAGAAATGAACGTAAAACCAAAGACTGGTGA 243 0.4444 MSTTSTTSSQEVSSNEWEFIDMSEQEEDLIRRMYGLVGDRWNLIAGRIPGRKAEEIERFWIMRHGDAFSVKRNERKTKDW* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0531 80 CDD SANT 22 60 IPR001005 -
Apr7g0531 80 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 4 76 - -
Apr7g0531 80 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 76 - -
Apr7g0531 80 Gene3D - 23 79 - -
Apr7g0531 80 Pfam Myb-like DNA-binding domain 23 61 IPR001005 -
Apr7g0531 80 SMART sant 18 66 IPR001005 -
Apr7g0531 80 SUPERFAMILY Homeodomain-like 23 61 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0531 Apr-Chr7 11782685 11784486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0531 22 60 MYB Transcription Factor Family AT5G52600 58.974 5.05e-12 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr7g0531 Myb_DNA-binding 1.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0531 K09422 - gmx:100814431 136.732