Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0530 ATGGACGGAATGCGAGAAAGAAACTCTCAGCTTGAATTCCAAGATGGAACTGATATTGGTTCCTCTCTATCTAATCTTATATTAACAAGCGGGGCAAACACCCTGGACTCAATTTTCTCCAATTTTCCTCCAACAAATGGCGCTACTTCTAGTAACTCTGTGTTGGATTACTTAGAACCCTATGGGTCTTCTGGGTTTGAGCCTCTGGGTTCCTCCGTTTACCTTCGCCAAAGAGACATCCTTCAAAAGTTCTACCAAGAAAGCCGAGGGAACGGGAATAGGTCTTTTGTTCCCACTTCCTTGGCAAATCCTTCTCTAAAATCCGTGTACACGAGTTCTTTGTCTTTGACTTCTTCTCTGTTGAACCCTTGCAAGAAAAAGCTCTACAGAGGAGTGAGACAGAGACACTGGGGAAAATGGGTGGCAGAGATTCGACTCCCTCAGAACAGAATGAGAGTGTGGTTGGGCACTTACGACACTGCCGAAGCTGCTGCATATGCCTATGACCGTGCCGCTTACAAGCTCCGTGGAGAATACGCGCGTTTGAATTTCCCCAATCTAAAGGACCCAAGCAAGTTAGGGTTCGGAGATTCCACCAGGTTGAATGCTTTGAAGAGTTCCGTGGATGCCAAAATTCAAGCCATATGTCAAAAGGTGAAAAGAGAGAGAGCCAAAAAGAATGCAGCAAAGAAGCTTAATGAATCGAAACGCGTGCAGAGTGAGAAATCACAGAAGATTAACTCCTCCTCTTGTTCTTCATCCTCGTTACCCTTGTCGCCATCAATTTTTTGTGATAATTGGGCGAACGAGTTGTTTTCACCGAGTGTTTCGGAGGATGGAATATGGAAGGGGGAGAACTCGCCGGCATCGGTTTCGACGGAATGTCCAAGGATGGCGACGGAGGAAACGGAGTTCGAAGGTTGTTCCCTGGCGAGGATGCCATCCTTCGATCCCGAGTTGATTTGGGAAGTTCTTGCCGTTTAG 984 0.4675 MDGMRERNSQLEFQDGTDIGSSLSNLILTSGANTLDSIFSNFPPTNGATSSNSVLDYLEPYGSSGFEPLGSSVYLRQRDILQKFYQESRGNGNRSFVPTSLANPSLKSVYTSSLSLTSSLLNPCKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSTRLNALKSSVDAKIQAICQKVKRERAKKNAAKKLNESKRVQSEKSQKINSSSCSSSSLPLSPSIFCDNWANELFSPSVSEDGIWKGENSPASVSTECPRMATEETEFEGCSLARMPSFDPELIWEVLAV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0530 327 Gene3D AP2/ERF domain 128 186 IPR036955 GO:0003700|GO:0006355
Apr7g0530 327 Pfam AP2 domain 129 178 IPR001471 GO:0003700|GO:0006355
Apr7g0530 327 SMART rav1_2 128 191 IPR001471 GO:0003700|GO:0006355
Apr7g0530 327 MobiDBLite consensus disorder prediction 226 257 - -
Apr7g0530 327 SUPERFAMILY DNA-binding domain 128 185 IPR016177 GO:0003677
Apr7g0530 327 PRINTS Ethylene responsive element binding protein signature 129 140 IPR001471 GO:0003700|GO:0006355
Apr7g0530 327 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Apr7g0530 327 ProSiteProfiles AP2/ERF domain profile. 128 185 IPR001471 GO:0003700|GO:0006355
Apr7g0530 327 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 13 326 - -
Apr7g0530 327 CDD AP2 127 187 IPR001471 GO:0003700|GO:0006355
Apr7g0530 327 MobiDBLite consensus disorder prediction 226 241 - -
Apr7g0530 327 MobiDBLite consensus disorder prediction 242 257 - -
Apr7g0530 327 Coils Coil 221 241 - -
Apr7g0530 327 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0530 Apr-Chr7 11759341 11761052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0530 17 326 AP2-EREBP Transcription Factor Family AT1G64380 49.568 5.25e-71 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr7g0530 AP2 6.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0530 - - gmx:100785364 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0530 7 11759341 11761052 Apr7g0530 7 11759341 11761052 ECH