Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0529 ATGCATTCCACCCACACCAAGTCCAAAGAAATCCAACGGCGCTACGATACCTACCGAAAGAAGAGAAAGCGTCCTTCCCACGTTGCTGTCGTTCCCACCATGGAATCCCCCGTCGCCGGAGAAGACAAGTGCCCCAACCCCCCCGCCTCCGCTTCTCACGGCTTCATATCCGTCATCGGCCGGAGGAGGGTGATGGAGGACGCCGTCAAGGTCGTTCCCGCTTTCGTGGCTGCGGAACAGCGTTCCTGCGGCTACGACTTCTTCGCGGTTTACGACGGTCACGGTGGGACGATGGTGGCGAATGCTTGCCGCGACAGGCTGCACGTGCTGGTGGCGGAGGAAGTGAAGGAGAGCGCGGAGAAGGGTTTGGATTGGTGTAAGGTGATGTGTTCGTGTTTCATGAAGATGGACGGGGAAATCGGAGTTGGTGGCGATGAGGCGGAGGAAGATGGCGGCGGGAACACGGTGGGTTCGACGGCGGCGGTGGTGGTGGTGGGGAAGGAGGAGATTGTGGTGGCGAATTGTGGTGACTCGAGGGCGGTGTTGTGTCGTGGCGGTGTAGCTGTGCCACTTTCACGTGATCACAAGCCTGATCTTCCAGACGAAAAAGAGAGGATTGAAGCCGCCGGTGGAAGAGTCATCAATTGGAATGGGAATCGAGTTTTGGGAGTACTTGCTACTTCCAGATCCATAGGGGATCACTGCATGAAGCCTTTTGTGATTTCTCAACCAGAGACCAACGTATACGCGCGAACAGAGTCAGATGAGTTTGTTGTAGTGGCCAGTGACGGCCTATGGGATGTTGTATCAAACAAGTTTGTTTGTGAGGTCGTGAGAAGTTGTCTCCATGGCCAAATGAGAAGAAATTTAAAACAAGACTCTATTATAAGTTACGCCACAGAGGCCGCAGCGTTATTAGCAGAGTTGGCTATGGCACGGGGAAGCAAAGACAACATCAGTGTTATAGTCATTCAGCTCAAGGATACAACTTGA 993 0.5388 MHSTHTKSKEIQRRYDTYRKKRKRPSHVAVVPTMESPVAGEDKCPNPPASASHGFISVIGRRRVMEDAVKVVPAFVAAEQRSCGYDFFAVYDGHGGTMVANACRDRLHVLVAEEVKESAEKGLDWCKVMCSCFMKMDGEIGVGGDEAEEDGGGNTVGSTAAVVVVGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKPDLPDEKERIEAAGGRVINWNGNRVLGVLATSRSIGDHCMKPFVISQPETNVYARTESDEFVVVASDGLWDVVSNKFVCEVVRSCLHGQMRRNLKQDSIISYATEAAALLAELAMARGSKDNISVIVIQLKDTT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0529 330 ProSiteProfiles PPM-type phosphatase domain profile. 52 326 IPR001932 -
Apr7g0529 330 SMART PP2C_4 42 324 IPR001932 -
Apr7g0529 330 Gene3D - 47 330 IPR036457 -
Apr7g0529 330 SUPERFAMILY PP2C-like 48 328 IPR036457 -
Apr7g0529 330 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Apr7g0529 330 PANTHER ALPHABET, ISOFORM E-RELATED 27 328 - -
Apr7g0529 330 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 27 328 - -
Apr7g0529 330 Pfam Protein phosphatase 2C 53 319 IPR001932 -
Apr7g0529 330 CDD PP2Cc 52 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0529 Apr-Chr7 11749800 11751044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0529 49 327 PP2C-type Phosphatase Gene Family AT2G29380 50.173 7.66e-89 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0529 K14497 - gmx:100813248 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0529 7 11749800 11751044 Apr7g0529 7 11749800 11751044 ECH