Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0502 ATGGGGTGCATATGCTCAAAATCATCCTCGAGAAAAGACAAAGTTGATGAATATGAGAAAGAAAAAGAGTTGAACAAGTCTTCAGCACAATTGGTTGCTCCTATTGTGTCAACTGCTGAGTTCGATGGTGGTAGCATTAAGGGTTCAGTGCCCCGTTTGACTAAGGCATGCTCACAAGTAATTAGGGCGTCTAACCAAGTGCCATCAGAGGACAAAAGCAACCATTTAGATGCCACCACAAAAAGCCAGCACAAGAAATGCATGACAATGAGATCTTGTGTAGGTGAAAGAAAGCCACTAATGAGTAGAATACTTAGCGTGCCACATTTTGGAGGAGAACATGTTGATGCTGCATGGCCATCATGGTTATCTTCAGTGGCAGCAGAAGCCATCAAAGGGTGGGTGCCTCGACGTGCAGACTCTTTTGAAAAATTAGACCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAAGGCCCGCGACCTTGAGACTGGTAAAATTGTGGCTTTGAAAAAGGTTCGCTTTTCGAGCACAGAAGCTGAAAGTGTCCGTTTCATGGCAAGGGAAATCTATATTTTGCGTCAACTTGACCATCCTAATGTCATGAAGCTTGAGGGTATTGTCACTTCAAGAACATCCACCAGTTTGTACCTTGTTTTTGAATACATGGAGCATGATCTTGCTGGGTTAGCAGCAATACATGGTGTGAAGTTCACTGAACCACAGATCAAATGTTACATGCAGCAATTGCTTCGTGGGCTTGAACACTGTCATAGTAGGGGTGTGTTGCACCGTGACATCAAGGGTTCAAATCTTCTGATTGACCAAGATGGAAATCTTAAGATTGGAGATTTTGGTCTTGCAACAGTTTATGATCCTTCTAAAAAGCAGCCATTAACTAGCCGTGTGGTGACTCTGTGGTATAGGGCACCTGAGCTTTTGCTAGGTGCTACTGAGTATGGAGCTGCAATTGACTTGTGGAGTGCTGGTTGCATTCTAGCAGAATTGCAAGTGGGCAAGCCTATCATGCCAGGAAGAACAGAGGTGGAACAAGTGCACAAGATTTTTAAACTTTGTGGTTCTCCATCTGAAGATTATTGGCAGAGAACAAAATTTCCTCATGCAACAAGTTTTAAGCCACAACAACCTTATAACCGCAAAGTTGCTGATACATTTAAAAAAATTTCTCCTGCGGCATTAGCTCTTGTTGATAAGCTTCTTGCAATACAACCAGAAGATCGAGGATCCGCAACTTCCGCACTTAACAGTGAGTTCTTCACTACAAACCCCTTACCTTGTGATCCATCGAGTTTACCGAAATTTCCACCAAGCAAGGAGTTTGATGCCAGGCGTCGAGAAAAGGAATCTGTGAGGAAAAATACTGAAGCTATTAAAGGACGTGGACCAGTATCTGTTTTAAGAGGAACAGGAGATACCAAAGTACTAGAAACACCAGAATATAATGCTAAGGGAGATATATTCGTGCAGGCCAAGTCAAATACAAAAGGGTCTCGTCTTAAATATCAATCCGAAGAGGATGGTGGATCTCATGGCAAGGGTGAGCCAAGCAGGATTAGTCTACAAAATGACTATGAACATTCTACTTCATTGATGTTCAATAGTACCACAGGACCATCCTCATTGAGTAAGAAACCAGAATCAACAATAATGAATTCACAGTTGCGGACACAGAGGTCTCATCTAAATCATGCAGCAGCAGATTTATCTATATCTTCAGTTAAAAAGGAACCAGGAATGTCTGCTATAGAACCCGTGATGGGTTTTGTGCCAAAGAGAAATAGGATCCACTGCTCTGGACCATTGGTGCCTCCAGGTGGGAACATTGATGACATGTTGAAGGAGCATGAACGATTAATGCAAGATGTTTTCCGTAGTGTAAAGAAGGCCAATCCGGAAAGCCAAAGTAAACGCCATTAA 1938 0.4267 MGCICSKSSSRKDKVDEYEKEKELNKSSAQLVAPIVSTAEFDGGSIKGSVPRLTKACSQVIRASNQVPSEDKSNHLDATTKSQHKKCMTMRSCVGERKPLMSRILSVPHFGGEHVDAAWPSWLSSVAAEAIKGWVPRRADSFEKLDQIGQGAYSSVHKARDLETGKIVALKKVRFSSTEAESVRFMAREIYILRQLDHPNVMKLEGIVTSRTSTSLYLVFEYMEHDLAGLAAIHGVKFTEPQIKCYMQQLLRGLEHCHSRGVLHRDIKGSNLLIDQDGNLKIGDFGLATVYDPSKKQPLTSRVVTLWYRAPELLLGATEYGAAIDLWSAGCILAELQVGKPIMPGRTEVEQVHKIFKLCGSPSEDYWQRTKFPHATSFKPQQPYNRKVADTFKKISPAALALVDKLLAIQPEDRGSATSALNSEFFTTNPLPCDPSSLPKFPPSKEFDARRREKESVRKNTEAIKGRGPVSVLRGTGDTKVLETPEYNAKGDIFVQAKSNTKGSRLKYQSEEDGGSHGKGEPSRISLQNDYEHSTSLMFNSTTGPSSLSKKPESTIMNSQLRTQRSHLNHAAADLSISSVKKEPGMSAIEPVMGFVPKRNRIHCSGPLVPPGGNIDDMLKEHERLMQDVFRSVKKANPESQSKRH* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0502 645 SMART serkin_6 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0502 645 PANTHER CELL DIVISION PROTEIN KINASE 72 635 - -
Apr7g0502 645 MobiDBLite consensus disorder prediction 444 462 - -
Apr7g0502 645 ProSiteProfiles Protein kinase domain profile. 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0502 645 MobiDBLite consensus disorder prediction 433 477 - -
Apr7g0502 645 Pfam Protein kinase domain 142 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0502 645 Gene3D Phosphorylase Kinase; domain 1 129 224 - -
Apr7g0502 645 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 72 635 - -
Apr7g0502 645 MobiDBLite consensus disorder prediction 1 23 - -
Apr7g0502 645 SUPERFAMILY Protein kinase-like (PK-like) 135 434 IPR011009 -
Apr7g0502 645 MobiDBLite consensus disorder prediction 9 23 - -
Apr7g0502 645 ProSitePatterns Protein kinases ATP-binding region signature. 148 171 IPR017441 GO:0005524
Apr7g0502 645 Gene3D Transferase(Phosphotransferase) domain 1 225 466 - -
Apr7g0502 645 MobiDBLite consensus disorder prediction 505 519 - -
Apr7g0502 645 CDD STKc_CDK9_like 142 426 - -
Apr7g0502 645 MobiDBLite consensus disorder prediction 503 526 - -
Apr7g0502 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0502 Apr-Chr7 11425641 11429610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0502 134 465 Core Cell Cycle Gene Families AT5G10270 52.011 2.16e-117 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Apr7g0502 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0502 K08819 - gmx:100791743 983.786