Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0497 ATGAGTTGGAGTTCAGCGTTGCATGGAACAAGCCCGAATGGGGACAAGAAGTTTAAGGGAGTTCGGCGTCGGAAATGGGGGAAGTGGGTGTCGGAGATTCGTGTTCCGGGGACGCAGGAACGCTTGTGGTTGGGAACCTACGCCACGCCGGAGGCTGCGGCGGTGGCTCACGACGTTGCTGTCTATTTTCTAAGGAGACCTTCAAAGTTGGACAAACTTAACTTCCCCGAAACCTTGTCTTCTTACTGTGTTCAGCATAGGGACATGTCTCCTAGGTCTGTTCAGAAGGTGGCTTCCGATGCTGGCATGGATGTTGATGCCAGAAACATTGTTGCGGGGGAAACGTCGACGGTGGCAGAAACATACGAGAATGAAAAGAGGATTGGTGGTGATGATGATCACGTGCACAATAGTAGTGTTGATGATTTGTTGTGGTGGGATATCGATGGCTTGGGGGATGATGATTTTGTGACTTGCAATGCAAGTTGCGAAGGGGAGGCCTTGAGCGTTTCCATTGAAGATTATGGAGCTTTGTGGAAGAGTTTATGA 549 0.5009 MSWSSALHGTSPNGDKKFKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAVYFLRRPSKLDKLNFPETLSSYCVQHRDMSPRSVQKVASDAGMDVDARNIVAGETSTVAETYENEKRIGGDDDHVHNSSVDDLLWWDIDGLGDDDFVTCNASCEGEALSVSIEDYGALWKSL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0497 182 CDD AP2 16 51 IPR001471 GO:0003700|GO:0006355
Apr7g0497 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 124 - -
Apr7g0497 182 Pfam AP2 domain 17 65 IPR001471 GO:0003700|GO:0006355
Apr7g0497 182 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Apr7g0497 182 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Apr7g0497 182 ProSiteProfiles AP2/ERF domain profile. 17 76 IPR001471 GO:0003700|GO:0006355
Apr7g0497 182 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF020 9 124 - -
Apr7g0497 182 SMART rav1_2 17 82 IPR001471 GO:0003700|GO:0006355
Apr7g0497 182 SUPERFAMILY DNA-binding domain 17 76 IPR016177 GO:0003677
Apr7g0497 182 Gene3D AP2/ERF domain 16 78 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0497 Apr-Chr7 11375099 11376018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0497 10 126 AP2-EREBP Transcription Factor Family AT1G71520 53.968 2.93e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr7g0497 AP2 3.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0497 - - aprc:113869965 353.214