Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0488 ATGGACATGCCTTCTTCAAGTGGTGCTGCCAGTTCCGCATACAGAGGAGTCCGAAAGAGAAAATGGGGGAAATGGGTATCCGAAATTCGCGAGCCAGGAACCAAAACAAGAATCTGGTTGGGGAGTTTCGAAACGCCGGAGATGGCGGCAGCTGCCTACGACGTCGCTGCGTTGCATTTCAGGGGACGCGAAGCAAGGCTCAACTTCCCTGAGCTTGCAAGCACTCTTCCTCGCCCTGTCAGCAACAATGCTGACCACATACGCATGGCGGCGCACGAGGCTGCGCTCAGGCTTAGGACCAACACGGTGGCGCCCCAGACTGGTGCCTCCGCCGCTTCAACCGCCGCTGCGCCACTTACCGTGAGACTCTCTCCGACTCAGATTCAGGCTATCAATGAGTCGCCTCTTGACTCGCCTCAGACGTGGATGCAAATGCCTGATGCGTTCATGTTGGATGATCAATCCATGGTGTTTGCAAATGGGTATGCGTTTGAGGATAGCGAGTGGGAGGATATGCAGAATGATTCTCTTTGGGATCCTTAG 543 0.5506 MDMPSSSGAASSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGREARLNFPELASTLPRPVSNNADHIRMAAHEAALRLRTNTVAPQTGASAASTAAAPLTVRLSPTQIQAINESPLDSPQTWMQMPDAFMLDDQSMVFANGYAFEDSEWEDMQNDSLWDP* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0488 180 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Apr7g0488 180 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Apr7g0488 180 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Apr7g0488 180 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Apr7g0488 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 179 - -
Apr7g0488 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF021 7 179 - -
Apr7g0488 180 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Apr7g0488 180 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Apr7g0488 180 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Apr7g0488 180 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0488 Apr-Chr7 11255462 11256241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0488 12 180 AP2-EREBP Transcription Factor Family AT1G71450 64.118 4.12e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr7g0488 AP2 3.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0488 - - aprc:113869810 345.895