Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0461 ATGAGGCTGAAGACATATGCGGGTCTTAGTTTGATTGCAACTCTGGCTATTACATATCATGCATTTAACAGCAGGGGCCAGTTTTATCCGGCAATGGTGTATCTGTCAACTTCCAAGATCAGTTTGGTTCTTCTTCTCAACATGGGTTTGGTCATTATGTGTAGTTTGTGGCAATTAACAAAAAAGATATTCCTGGGTTCCCTCCGAGAGGCAGAGATCGAGAGGCTTAATGAACAATCATGGAGGGAGGTCATGGAAATCCTCTTTGCAATTACTATATTTAGGCAGGACTTCTCTGTCACATTTCTTGCGATGGTCACTGCATTGTTGTTAATAAAGGCTTTCCACTGGTTGGCTCAAAAGAGAGTCGAGTACATTGAGACCACGCCTGCAGTTCCCTTGTTGTCCCATATACGAATTGTATCTTTTATTGGTTTTCTCCTTCTTCTAGATAGCCTTTTCTTATACAGTTCTATGAAGCATTTGATAGATACGTGGCAGGCTTCAGTTTCACTATTCTTTTCCTTTGAGTACATGATTCTCGCCACGACAACAGTGTCAATTTTTGTAAAATACCTTTTCTATGTCAGTGACATGCTTATGGAGGGACAATGGGAAAAGAAACCAGTCTTCACATTTTATCTGGAACTTATTAGGGACCTGCTTCACTTGTCTATGTATCTGTGCTTCTTTCTTGTAATTTTTGTAAACTATGGTATTCCCTTGCACTTAATACGGGAGCTGTACGAGACGTTTAGGAACTTCAGAATCCGTGTTGCTGATTACATACGATATCGTAAAATCACTTCAAATATGAATGATCGCTTTCCAGATGCAACCCCTGAAGAACTTAATGCAAGTGATGCAACCTGCATTATCTGTCGAGAAGAGATGACTACGGCCAAGAAGCTTATATGTGGACATCTTTTTCATGTTCATTGCCTACGATCATGGCTGGAGCGGCAACATACTTGCCCCACCTGCAGAGCCTTGGTTGTACCACCAGAAAATGTGACCACTGCAGCTGTAGGGCAGCAGCAAGGATCACAGTCAGATGGTCACCGACATGAAACTGGGACCAGCACTAGAACTACATCACAAACTGAAGTTGGCAAAGGGGTAGGTACTGATAGTTTAAGTCGACATCAAGCCAGACTCCAAGCTGCTGCTGCTGCAGCTTCAATATATGAGAAGTCTTATGTGTACCCCTCTGCAACTTCATTTGCATGCTCTCTTGGGTCCACCCTTCATCCCCCAGATCAAATATCTATACCTGAATCTACAAACGCTGACCATAATGGAGCACAAGCTTCCAGTGAACAAGCACAAAGGCAGTTTCTTATCCTTGGTGGACCAACAAATGTATGCTTTCCTCCAATGCAACACTTCCAATTTCTTAACCCTGTTTATGGAGAAGGGTTTGGAAATGATCCAAATGTCCCAAGCTCTCAGCTGGAAGCTCAAAGAAAACTTCTTCAATGCCAGATTCAGAATCTGCAAAATGAGCTCGAGATTTTGCAGAGGATAAAAGGTGACAATAGTGTAGGTGAGGGCACATCCTCATCAGATAGCAGAGGCAAGTGTATCACTTCCACGTCAGCAGAATCTGGTCATGGTTATCTTGAGGAGATTCAAGATGGAAAAGCATGA 1650 0.4267 MRLKTYAGLSLIATLAITYHAFNSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCSLWQLTKKIFLGSLREAEIERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKAFHWLAQKRVEYIETTPAVPLLSHIRIVSFIGFLLLLDSLFLYSSMKHLIDTWQASVSLFFSFEYMILATTTVSIFVKYLFYVSDMLMEGQWEKKPVFTFYLELIRDLLHLSMYLCFFLVIFVNYGIPLHLIRELYETFRNFRIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENVTTAAVGQQQGSQSDGHRHETGTSTRTTSQTEVGKGVGTDSLSRHQARLQAAAAAASIYEKSYVYPSATSFACSLGSTLHPPDQISIPESTNADHNGAQASSEQAQRQFLILGGPTNVCFPPMQHFQFLNPVYGEGFGNDPNVPSSQLEAQRKLLQCQIQNLQNELEILQRIKGDNSVGEGTSSSDSRGKCITSTSAESGHGYLEEIQDGKA* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0461 549 PANTHER RING ZINC FINGER PROTEIN 1 434 - -
Apr7g0461 549 SUPERFAMILY RING/U-box 271 336 - -
Apr7g0461 549 MobiDBLite consensus disorder prediction 340 377 - -
Apr7g0461 549 MobiDBLite consensus disorder prediction 513 534 - -
Apr7g0461 549 Pfam Ring finger domain 290 329 IPR001841 -
Apr7g0461 549 MobiDBLite consensus disorder prediction 420 441 - -
Apr7g0461 549 CDD RING-H2_synoviolin 288 329 - -
Apr7g0461 549 PANTHER - 1 434 - -
Apr7g0461 549 SMART ring_2 291 328 IPR001841 -
Apr7g0461 549 ProSiteProfiles Zinc finger RING-type profile. 291 329 IPR001841 -
Apr7g0461 549 MobiDBLite consensus disorder prediction 340 374 - -
Apr7g0461 549 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 263 337 IPR013083 -
Apr7g0461 549 Coils Coil 482 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0461 Apr-Chr7 10940088 10946753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0461 1 533 C3H Transcription Factor Family AT3G16090 64.981 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0461 K10601 - gmx:100816441 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0461 7 10940088 10946753 Apr7g0461 7 10940088 10946753 ECH