Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0459 ATGGATCCTTTTGATGATATAGCTCCTGTTGCTCCCAGTCGGCCAGGCCTGAAGTTTATGCCAAAGGCCAAATTGAAACAGTTGCCGCGAAAGGAAATATCTGTATTAGATCATGCAACCTCATCTACAACATTCAGTGATCGTCCACAGGTAGAAATTCCAAATTCAGAGGATGCCACAAATCCTAAAACAAAGAATTCTCAACAAGTTAGTGCAAAAGGACATACTGTGGCCTTAGTGGATGATCATCTTCATTCCACAATTGCAGCATCTGACATTGATCAGATTTTTACAAACTTTCCAAGATCAGCAAGTGAGGCAGGTCCTGTAGATTTTGAGGTGGGCTCAGGCACTAATATCATACCTCAGACCAACCTCAATACTGAAAATGAATTGAATAACGTGACTGCTCCATGTACAACTTGCTCAATCATAGATGGGACGCAAGAACCACCTAAAAATGGGGAAGGTTCATTTCTTGATAGCAGCAAATGTTTGGAACTTGTGGATAATTCATTGCAAGTTGAAACGGATGTGGGCTTCAAAAGTGATTCAGATAATAAAGTTGCAATATTTGAGAGCAACATTCAATCAAAGTCAAACTTTGGAAGAGAACAAGAGGTAGTATCTGCAGAATTTGAATTGGATCCTTTCAGCAATGTCCTGCCTGATCCTGGTGCTAGAAATGCTCGTAAATTTCAACCCAAGATTAAGCCACGACCTAGAGTAGGCAATTCGGCAGCTAACGCCTCTTCTTCATCTAATGTTATGACGGAAAAGTCTGTTGAGTTGCCTAATTCTTGCATGAATGAATTTCAATCTAATGGTGATGGGAGTGACAGACTAAACCAGTCAACCAGTTTACCTTTACCATCACAGATACTTAGGACAACCGATTTACCCAATAAGCCTGATTATATGAGCCCAAGTATTCCATTCTCTGAAGACAACACAGGCTTGGCACCGGTAATTCCTTCCCAACTGGATTCCCTTAATGCTATGCTTTTGGAGGTTGCAACTCATAATGGAACTAGAGATTGGCCTTCTAGCTTTGGTAAATCATCCGGAGAGGCTGCAGACATTTTTTCTGGGCTGGAATCCCTTGATGACTTTCTCACCCAAGCTGCCTCTGATACAGGAAAGCCAGCTCTTCATTCTTTCAATGAGAAGGGTACCGATGAAAATTTTGTCAATCATAATTGTAGATCTATCAACTCTTTTGGGGTATGTGATACTACCCAAGTTCAAAGGTGTCCCATGTATCAGACCACCCAAGATTCAATAACCTTCAATGAAGCTGCAGTTCTCAATGAGGACGATACACACACTAACAATAGAAGGTTGGAAACGAAGGAAGTTGTGGACTTGAATCCTGCCTGCCCAGGTGACGATGTCTTTGAGTATCAATCTATGAAATCTGGTACAGATCCAACTTCTGAAACTCCAGTGCATGAAGAGTTGACAAATGCTGCAGATAGTCCCACATTGGCTGATTTTTTGCATGCAGATGTTGCTAGAGAAAAAGTAAATTTTCATTTCATTTACCATGTTTCTCAGGATGCTAATGAGAGAACAAAGGATGGCTCAATTTCAAGTTCGTCGAGGAAGAATAAAAGATCGTCTATTATTGGAGAGGAGGATAATGATGGTAACACCTCTAGGCAGCTGAGAAAACAAACGGCTCACAAACCTACTAACAGTTCATTGAATGATGATGTTGAGGATGATGATAACCTTGACGCTAATGGAGATGAACTTGAAGAAAATGGTGATGACCATGAAGTTGATTATTCATCCAAGAAGGGAAGAGCATCAACAAGTTCAAAGAAGAAATCTGGTGCTAAAAATGGCAAGACAACTCAAAAGCGCAAGAGGGCTAATGATGATTTAGAAAAAACTATTAAAGAACCTCCTAAAAAGTTCTCTCATTCAACCCAACGAAGGAAAAGAACTGTGGACAAGGCTCTGCTGGAAATTCCTGAAGATGAACTTGATCCTCGAACATTGCCTATCAAGGATATTATTTTACTCGCAGAATATAGGGAGCGGCTTGCGAAAAAGGAGGGAACACCTCAAACAACTTCCACCTATCAAAGTGGTGGAGATTTTCTTCATGAGGCCAGTGCTAATTATGAAGAGGAGGAGATCTTTGGTTCAGAAGATGGTAGAGACCCAGATGATGATCGAGCCAATGGAAGGATTCCATCAGCTTCCTCTTTATTCAATTACCAGTCTTTCATGGAAAAGGCACCTAGGGGAAAATGGTCGAAACAAGATACTGAATTGTTTTATGAGGCTGTTAGGCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGAGGCAACATCCTTTACGGTTATCTGATGCTGTAAATAATCGTGCAAAAGATCACTCTCATTTTAAATTGGTGATTGAACGTCTGGAACTAGCTTCCACCAAGGCAGAAGACGACCCCAGTAGAGATGCCTCAGATTTTATGATGGGGGAGGAGGTGACGGACCTAACACCTGGAACTAATGAGGAGGTTGCAACAACTGAGCAGGGCGCCGATGTTAAAGCTCAGGAAGATTCTGCAGCAGTTCATAGTCCAGAGCAGTCTGATGATAGCGATGATGACTTTCAAAAATGGGCTCAGTATAAGAGTGCCTATTAG 2706 0.4124 MDPFDDIAPVAPSRPGLKFMPKAKLKQLPRKEISVLDHATSSTTFSDRPQVEIPNSEDATNPKTKNSQQVSAKGHTVALVDDHLHSTIAASDIDQIFTNFPRSASEAGPVDFEVGSGTNIIPQTNLNTENELNNVTAPCTTCSIIDGTQEPPKNGEGSFLDSSKCLELVDNSLQVETDVGFKSDSDNKVAIFESNIQSKSNFGREQEVVSAEFELDPFSNVLPDPGARNARKFQPKIKPRPRVGNSAANASSSSNVMTEKSVELPNSCMNEFQSNGDGSDRLNQSTSLPLPSQILRTTDLPNKPDYMSPSIPFSEDNTGLAPVIPSQLDSLNAMLLEVATHNGTRDWPSSFGKSSGEAADIFSGLESLDDFLTQAASDTGKPALHSFNEKGTDENFVNHNCRSINSFGVCDTTQVQRCPMYQTTQDSITFNEAAVLNEDDTHTNNRRLETKEVVDLNPACPGDDVFEYQSMKSGTDPTSETPVHEELTNAADSPTLADFLHADVAREKVNFHFIYHVSQDANERTKDGSISSSSRKNKRSSIIGEEDNDGNTSRQLRKQTAHKPTNSSLNDDVEDDDNLDANGDELEENGDDHEVDYSSKKGRASTSSKKKSGAKNGKTTQKRKRANDDLEKTIKEPPKKFSHSTQRRKRTVDKALLEIPEDELDPRTLPIKDIILLAEYRERLAKKEGTPQTTSTYQSGGDFLHEASANYEEEEIFGSEDGRDPDDDRANGRIPSASSLFNYQSFMEKAPRGKWSKQDTELFYEAVRQFGTDFSMIQQLFPDKTRHQIKLKYKKEERQHPLRLSDAVNNRAKDHSHFKLVIERLELASTKAEDDPSRDASDFMMGEEVTDLTPGTNEEVATTEQGADVKAQEDSAAVHSPEQSDDSDDDFQKWAQYKSAY* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0459 901 PANTHER TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG 228 890 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 521 652 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 571 592 - -
Apr7g0459 901 ProSiteProfiles SANT domain profile. 754 798 IPR017884 -
Apr7g0459 901 SUPERFAMILY Homeodomain-like 753 801 IPR009057 -
Apr7g0459 901 MobiDBLite consensus disorder prediction 830 845 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 470 489 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 830 892 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 471 488 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 1 23 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 36 72 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 224 258 - -
Apr7g0459 901 Pfam Myb DNA-binding like 745 825 IPR039467 -
Apr7g0459 901 SMART sant 751 799 IPR001005 -
Apr7g0459 901 MobiDBLite consensus disorder prediction 268 287 - -
Apr7g0459 901 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 228 890 - -
Apr7g0459 901 CDD SANT 754 795 IPR001005 -
Apr7g0459 901 MobiDBLite consensus disorder prediction 621 641 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 521 553 - -
Apr7g0459 901 MobiDBLite consensus disorder prediction 714 735 - -
Apr7g0459 901 Gene3D - 755 819 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr7g0459 Myb_DNA-bind_7 6e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0459 K15198 - gmx:100792788 1080.86