Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0456 ATGCTGTCACTCGCACCATCCCTTGATGCCAAAAATGCTACCACTGGCCAAAACCAACCCTGCGTTTCCCAAAATACCCACATATTCAAATCAAAATTACCAGATATACCCATCTCTAACCACCTCCCCCTCCACGCTTACTGCTTTCAGAACCTCTCCCAATTCGCCGACCGTCCCTGCCTCATCGTCGGCGCCGCCGCCAATATCTACACCTACGCCGAGACTCATCTCATTTCCCGAAAAGTTGCCGCCGGCCTATCCAACCTTGGCGTCGGAAAAGGTGACGTCATCATGATTCTTCTCCTAAACTCCGCCGAGTTCGTCTTCTCCTTCTTCGCTGCCTCCATGATTGGCGCCGTCGCAACCACCGCCAATCCGTTCTACACTCCCGCCGAGATATTCAAGCAATTCGCCGCCTCCAAGGCGAAGGTCATCATCACGCAGGCAATGTACGTGGACAAGCTCCGCAACCACGACGACGCGAAACTAGGCGAAGACTTCAAGGTGATCACCGTCGACGATCCGCCGGAGAACTGCCTGCATTTCTCGGTGCTCTCGGAGGGAAACGAGAGCGAAGTGCCGGAGGTGGAGATCCATCCCGACGACGCGGTGGCGCTGCCGTTCTCCTCCGGCACGACGGGGTTGCCGAAGGGAGTCGTTCTGACGCACAAGAGTTTGACGACGAGCGTGGCGCAACAGGTGGACGGCGAGAACCCGAACCTGCACCTGAGTACCGACGACGTTCTCCTCTGCGTGCTTCCGTTGTTTCACATATTCTCTCTCAACAGCGTTTTGCTCTGCGCGCTCCGAGCGGGGAGCGCTGTTCTGCTGATGCATAAATTCGAGATTGGTACGTTGCTGGAGCTGATACAGCGGCACCGCGTGACGGTGGCGATGGTGGTGCCGCCGCTCGTGCTGGCGTTGGCCAAGAATCCCATGGTGGCGGACTTTGACCTCAGCTCCATACGGTTGGTGCTGTCGGGTGCTGCACCCTTGGGCAAGGAACTCGAAGAGGCTCTTCGGAGTAGGGTGCCTCAGGCTGTTCTGGGACAGGGATACGGAATGACAGAAGCTGGACCGGTGCTATCCATGTGCTTGGGCTTTGCAAAACAACCATTTCCAACAAAGTCAGGCTCTTGTGGCACTGTTGTAAGAAATGCAGAGCTCAAGGTTGTTGATCCTGAAACTGGTCGTTGTCTTGGCTATAATCAACCCGGTGAAATTTGCATCCGAGGACAACAGATCATGAAAGGATATCTGAACGATGACAAAGCTACAGCATCGACCATAGATGATGAGGGGTGGCTTCATACAGGTGATGTTGGCTATGTAGATGATGACGATGAGATTTTCATTGTTGATAGGGTGAAAGAACTCATCAAATTCAAAGGCTTCCAGGTGCCCCCTGCTGAACTTGAAGGCCTTCTAGTAAACCATCCCTCTATTGCAGACGCAGCTGTTGTCCCACAAAAGGATGTTGCTGCTGGTGAAGTTCCTGTTGCTTTCGTGGTGAGATCAAATGGCTTTGATCTAACTGAAGAGGCTGTAAAGGAGTTTATTGCTAAACAGACTTATCATCTTTGTTCGTTTGGTTGTCTTGGGACTGTTACTGACATGGAGGATCAAGCATCAAAATATTGA 1641 0.5277 MLSLAPSLDAKNATTGQNQPCVSQNTHIFKSKLPDIPISNHLPLHAYCFQNLSQFADRPCLIVGAAANIYTYAETHLISRKVAAGLSNLGVGKGDVIMILLLNSAEFVFSFFAASMIGAVATTANPFYTPAEIFKQFAASKAKVIITQAMYVDKLRNHDDAKLGEDFKVITVDDPPENCLHFSVLSEGNESEVPEVEIHPDDAVALPFSSGTTGLPKGVVLTHKSLTTSVAQQVDGENPNLHLSTDDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGTLLELIQRHRVTVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEEALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKQPFPTKSGSCGTVVRNAELKVVDPETGRCLGYNQPGEICIRGQQIMKGYLNDDKATASTIDDEGWLHTGDVGYVDDDDEIFIVDRVKELIKFKGFQVPPAELEGLLVNHPSIADAAVVPQKDVAAGEVPVAFVVRSNGFDLTEEAVKEFIAKQTYHLCSFGCLGTVTDMEDQASKY* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0456 546 Pfam AMP-binding enzyme 51 462 IPR000873 -
Apr7g0456 546 Gene3D - 20 456 IPR042099 -
Apr7g0456 546 Pfam AMP-binding enzyme C-terminal domain 471 523 IPR025110 -
Apr7g0456 546 CDD 4CL 38 523 - -
Apr7g0456 546 SUPERFAMILY Acetyl-CoA synthetase-like 38 523 - -
Apr7g0456 546 ProSitePatterns Putative AMP-binding domain signature. 206 217 IPR020845 -
Apr7g0456 546 PANTHER 4-COUMARATE--COA LIGASE 3 27 525 - -
Apr7g0456 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 27 525 - -
Apr7g0456 546 Gene3D - 457 533 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0456 Apr-Chr7 10891397 10895641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0456 27 469 Monolignol Biosynthesis Gene Families AT1G65060 72.870 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0456 K01904 - gmx:547930 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0456 7 10891397 10895641 Apr7g0456 7 10891397 10895641 ECH