Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0417 ATGTTGAAGATGGGTTCTGAAGGCGAGGGTGTTAGGACACCAAAGATGGAATTGGAAGCAGAAGGAACTTTAAATTCAAAGATGAAGGGTGTTGGAAACCAGAGCAGTAAAGACATGATTTTCAGAGCTGACAGAATTGATCTTAAGAGTTTGGACGCCCAGCTAGAAAAGCACTTGAGCAGGGTTTGGTCGAGAAGCCTTGATACAAAAAGGCCTACAGAAGAGTGGGAGATTGATCTGGCCAAATTGGATTTACGGTATGTTGTGGCTCATGGGGCCTATGGTACTGTATACAGGGGTACATATGATAACCTAGACGTTGCAGTGAAAGTGTTGGACTGGGGTGAGGATGGTGTAGCCACTGCTGCTGAAACTGCTGCTTTACGGGCATCTTTTAGGCAGGAGGTTGCTGTCTGGCACAAACTTGAGCATCCAAATGTGACAAAATTTATTGGAGCTTCAATGGGTGTTTCAAGTCTTAAGATTCCCTCGAAAAACTCTTCGAGTGGGACTGAAGAGACCCTTCCTTCTAGAGCATGTTGTGTTCTTGTTGAGTTTCTCTCTGGTGGGACACTAAAGCAATACTTGATCAGAAATAGGCGGAAGAAACTTGCTTATAAGATTGTGATTCAGCTGGCTTTGGACCTCTCTAGGGGTCTTAGTTATCTGCATTCGAAGAAGATTGTTCATCGCGATGTGAAATCAGAGAATATGTTACTAGATGCCAACCGGAATCTAAAAATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTATGAATCCAAGTGACATGACGGGTGAAACTGGAACCCTTGGATACATGGCCCCTGAGGTTCTGGATGGGAAGCCTTACAACAGGAGGTGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTATTGCTGTGATATGCCTTATCCAGATCTAAGCTTTGCTGATGTATCATCTGCAGTTGTTCGCCAGAATTTGCGACCAGAAATTCCGAGGTGCTGTCCAAGCGCCTTGGCAAATATCATGCGCAAATGTTGGGATGCAAATCCAAACAAGCGTCCAGAAATGGAGGAGGTGGTGAGAATGCTGGAGGCACTTGATACAAGCAAAGGTGGTGGAATGATACCTGAAGATCAGGCTTCGGGTTGCTTTTGTTTTGCACCAACCCGTGGTCCCTAA 1173 0.451 MLKMGSEGEGVRTPKMELEAEGTLNSKMKGVGNQSSKDMIFRADRIDLKSLDAQLEKHLSRVWSRSLDTKRPTEEWEIDLAKLDLRYVVAHGAYGTVYRGTYDNLDVAVKVLDWGEDGVATAAETAALRASFRQEVAVWHKLEHPNVTKFIGASMGVSSLKIPSKNSSSGTEETLPSRACCVLVEFLSGGTLKQYLIRNRRKKLAYKIVIQLALDLSRGLSYLHSKKIVHRDVKSENMLLDANRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSALANIMRKCWDANPNKRPEMEEVVRMLEALDTSKGGGMIPEDQASGCFCFAPTRGP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0417 390 ProSiteProfiles Protein kinase domain profile. 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0417 390 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 14 384 - -
Apr7g0417 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Apr7g0417 390 SMART serkin_6 83 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0417 390 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 14 384 - -
Apr7g0417 390 PRINTS Tyrosine kinase catalytic domain signature 184 197 IPR001245 GO:0004672|GO:0006468
Apr7g0417 390 PRINTS Tyrosine kinase catalytic domain signature 222 240 IPR001245 GO:0004672|GO:0006468
Apr7g0417 390 PRINTS Tyrosine kinase catalytic domain signature 288 310 IPR001245 GO:0004672|GO:0006468
Apr7g0417 390 PRINTS Tyrosine kinase catalytic domain signature 332 354 IPR001245 GO:0004672|GO:0006468
Apr7g0417 390 Gene3D Phosphorylase Kinase; domain 1 72 164 - -
Apr7g0417 390 Gene3D Transferase(Phosphotransferase) domain 1 189 373 - -
Apr7g0417 390 CDD STKc_MAP3K-like 89 361 - -
Apr7g0417 390 SUPERFAMILY Protein kinase-like (PK-like) 63 361 IPR011009 -
Apr7g0417 390 Pfam Protein tyrosine and serine/threonine kinase 86 361 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0417 Apr-Chr7 10274677 10278236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0417 17 390 MAP Kinase Kinase Kinase AT3G22750 77.926 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Apr7g0417 PK_Tyr_Ser-Thr 7.5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0417 - - gmx:100803917 717.998