Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0415 ATGGACACACCAGAGAGGAACCAGATCAACCCTCCCTGCTCTAAGTTTGAGGATTCACCTGTATTCAACTATATCAATAGTTTGTCTCCTATAAAGCCTGTCAAGTCTGTTCACATTAGTCAGACTTTCAATTCACTAAGCTTTTCTTCACCTCCATCTGTTTTTACATCACCCCATGTCAGCTGTCTCAAGGAATCAAGATTTCTCCGAAGACAATACCCACTGGATGCTTCAAAGCCCAAGGTTTTATCTGAAGATGTAAATAAAGTTCACTCGAGTGAGGAGACTCTTGCAGATTCTACACGTCCACATCATAACTCCGGCAAATTACAGGAAAACACTGATAAGGGGATTTCTGTAGGAGATTCTTCAATTGAGCTATTGAGTGAGCACACAAAATTCTCAGTTGAGCTACCACAAACTTTAAAATATAATTGTGGTAGCCCTGGCTATGATCCTCCACTTTGTGGTGATGAGGCTAACTCTCTTTTGGAGTTGCCTGGTGAGGCAGCATCAGATGTTGCCTATGTTCAGGAAGGCTGTAAAACGGATCCAGTTGAGGGTGAAGTTCATTTTCAAGAAATATGTCAGATTGAACCAAAGGATGAGGGTCCAGACTGTTATTGGGATAGTTTAATTCCCAATGCCACTGATATGTTAATTTTTAATTCCCCAGGTGAAGCAGAAGCTTTTAAGGGTCTGATGCACAAACCCTTGGACTCTTCTATACGAGTTTGTGATTTTATGCCTCTGCTTCCACAATCTACCATCGATAATGGTAGGAAAATACACATTGTTGATTCAGTTGCTTCAGGTTCTGAACATGAAATTGAAGATCACTGTTCTGAGCCAATAACAGCCACAGACAGAGAGCAAACACAGGGTAATCTTGCCAATGTTGCTTTGATGACTAGCAATCCAAACGAGAAGGCAAATGATGAGCTTGTTTCTGTCACGCACCGTGCTATACGGAGGCGCTGTCTAGACTTTGAGATGGCCAGTGTGCGAAGGAAGAACTCAGATGATAATTCAAACACCAGTTCTGGTGTGCTACAGTCTGATGAGAGGAATGTTGGTAATGAAAAGCAACAGCTTCCTGCAAAACGCAATGGAAATTTTCAGAGGGGCATCCTGCGGGGAATTGGTTTACACTTGAATGCACTTGCTGCCTTAAAAGATTACAATGGCATACAAAATGAAAAATCATCTTCTGGAACACAACTCAATCTGCCCAGCTCTTCTTTGCAAATCTCTACTAGCCAAGATGATCAGCAACTAGCATTGGTACCTGTATCATCTGAAAGAGAATTGGATCCATCAGACAATGGGGTTCAACCAGCTGAAGATTGTTACCAGGCATACATGGCTGGTGAAGACTTCAATCAGAGTAGCCCCAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGAGAAACTGAGGGCTGTAAACGATGTAATTGCAAAAAATCGAAGTGTTTGAAGCTCTATTGTGAGTGCTTTGCCGCTGGTGTCTACTGCATAGAGCCCTGCTCCTGTCAGGAGTGCTTCAACAAACCAATTCATGAAGACACTGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGATTCTGTACCTGATATTGGGGATGATCCAAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGCAACTGCAAGAAATCGAACTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGGGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCTTATGGTAGAAAGGATGGTTCTGCTCCTATATGCCTAGAAACTGACTCAGAAGAAACAGAAGCATCTGACAAGGGTGTGGCGGAAAAAGCCCTGCAGAAAACGGAAATTCAGAATGCTGAAGATCATCCAGATTCTGCTATTGTGTCAACACCATTACGGCTTTCCAGGCCATTGCTTCCGTTGCCCTTTTCATCAAAGGGAAAGCCACCAAGGTCTTTTGTTACAACCATCTCTGGTTCTGCATTGTTTGCCAGCCAAAAGCTTGGAAAACCAAATCATCTCTGGTCTCAAGCTAAGCATTTTCAAACTGTCCCAGATGACGAAATGCCAGAAATTCTCCGAGGTGATAGCTCTCCTATCACTTGCATCAAAACTTCTTCTCCAAATGGAAAGAGAATCTCCTCTCCCAACTGTGACTTGGGATCATCTCCTAGTCGCAGAGGTGTGAGGAAGTTGAGATTACAAGCCATTCCTTCATTTCCTTCTCTCACCCCTCACCCTTAG 2313 0.4315 MDTPERNQINPPCSKFEDSPVFNYINSLSPIKPVKSVHISQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRQYPLDASKPKVLSEDVNKVHSSEETLADSTRPHHNSGKLQENTDKGISVGDSSIELLSEHTKFSVELPQTLKYNCGSPGYDPPLCGDEANSLLELPGEAASDVAYVQEGCKTDPVEGEVHFQEICQIEPKDEGPDCYWDSLIPNATDMLIFNSPGEAEAFKGLMHKPLDSSIRVCDFMPLLPQSTIDNGRKIHIVDSVASGSEHEIEDHCSEPITATDREQTQGNLANVALMTSNPNEKANDELVSVTHRAIRRRCLDFEMASVRRKNSDDNSNTSSGVLQSDERNVGNEKQQLPAKRNGNFQRGILRGIGLHLNALAALKDYNGIQNEKSSSGTQLNLPSSSLQISTSQDDQQLALVPVSSERELDPSDNGVQPAEDCYQAYMAGEDFNQSSPKKKRRKLEPAGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQECFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPDIGDDPNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPICLETDSEETEASDKGVAEKALQKTEIQNAEDHPDSAIVSTPLRLSRPLLPLPFSSKGKPPRSFVTTISGSALFASQKLGKPNHLWSQAKHFQTVPDDEMPEILRGDSSPITCIKTSSPNGKRISSPNCDLGSSPSRRGVRKLRLQAIPSFPSLTPHP* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0415 770 MobiDBLite consensus disorder prediction 84 116 - -
Apr7g0415 770 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 769 - -
Apr7g0415 770 SMART CXC_2 479 520 IPR033467 -
Apr7g0415 770 SMART CXC_2 565 606 IPR033467 -
Apr7g0415 770 MobiDBLite consensus disorder prediction 339 370 - -
Apr7g0415 770 MobiDBLite consensus disorder prediction 84 111 - -
Apr7g0415 770 MobiDBLite consensus disorder prediction 722 745 - -
Apr7g0415 770 MobiDBLite consensus disorder prediction 712 751 - -
Apr7g0415 770 ProSiteProfiles CRC domain profile. 480 605 IPR005172 -
Apr7g0415 770 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 769 IPR044522 GO:0003700
Apr7g0415 770 MobiDBLite consensus disorder prediction 400 423 - -
Apr7g0415 770 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 568 603 IPR005172 -
Apr7g0415 770 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 482 517 IPR005172 -
Apr7g0415 770 MobiDBLite consensus disorder prediction 337 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0415 Apr-Chr7 10257205 10262905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0415 16 769 CPP Transcription Factor Family AT4G14770 44.189 2.47e-155 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Apr7g0415 TCR 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0415 - - gmx:100804447 1311.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0415 7 10257205 10262905 Apr7g0415 7 10257205 10262905 ECH
Apr5g1122 5 15827965 15832461 Apr7g0415 7 10257205 10262905 ECH