LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g0389	ATGTCTTTAGCTATGTTTCTGCCTTTCATTCTTGCACTAGTCTTACATCTTAATGGCTTACATGCCCAGAATTCCATGGCAATAGCATTAAACACAAGCATCACTGCTGGATCAAACTCCACTTGGAAGTCACCCTCTGGTGATTTTGAATTTGGATTCCATCGTCTTCCAACTGGTCTTTTTCTTGTGGGAATATGGTTTGGGAAGATCCAAGAGATAACATTTGTATGGTACCATAGTCCCCCTGTGGAACCAAGTTCCTTAATCGATTTCACTTCTTTGGGACACCTTGTGGTAACACACCCAAATGGATCTATTGCTCAGACAATATATGATGGAGGAAGCACTGCAACTTCTGCACACATGCAAGATGATGGCAATTTTGTCATGAAGGACTCCAACTTAGGATCTGTTTGGGAGAGCTTCAACTCTCCAGCTAACACAATCTTACCGGGTCAAACCTTGCAAAGTAATCAAATACTCTACTCTAAGGGGAAAGGAACTTCAAACTACTCAATGGGAAACTTCATGCTGCAAATGCAAGGTGATGGGAACTTGGTGCTAAAAGCATACAAATGGTCAGACCCTGCATATTGGTACACTTTAACCACATCATTCCCAAATGCTAATTTGGTGTTTGATGCTACTACTGCTTCCTTGTATCTTGTTAGTGGCTCTAGGAATATTTTCAATGTAACAAACAAAGCTCCAACCCCAGTAAATGATTATTATCACCGTGCTACAATCGATGAGAATGGCAATTTCCATCAATATGCATATCACAAAAGAAATGGCACTGAGTGGAGGAATGTTTGGAAAGCTGTTGAGGATCCCTGCAGAGTGGACGCTGTATGTGGTGTGTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTGAAGTGTGATTGTATTCAAGGTTATATCCCATTGGATCAAGAAGATTTGTCCAAAGGGTGTCATCCAGCAGCTGTAATCAATTACTGTGCTGAACCTTCTGTGATGAACTTCAAGGTGCAGGTGTTTGAGGACACTGATTTTCAATTTTATCCAGATTTTTCTCACCAAACAGAAGTTGATTTGGAAGGTTGTAAGAAGTCTGTGATGGAAGATTGCAATATCATTGCTGCAACTTATAACGCTTCAACCTTTACATGTGCCAAGAAGAGCATGCCGTTGCTGAATGCTAGAAGGAGTTCATCTTCGAAGGGACAGAAAGCACTTCTCAAAGTTCCTAACAGTGTTGAGTCTAGAATATCTAAAGTTTCCAAGAAGAAGAGATTTAATGTGAGGGTTTTTTTGAAGGTTATGCTTGCAGTTAGTGCCACTTTTGCCTGTTTCTTTGGTGCCCTTGCTGTTTACTATCATCCTTTTGCTCAGAGACTAACAAGAAGAAGGAAGTCTCTGAATGCAGCTGCTATTGGAATCAACTTCAGGGAATTCACATTCCAGGAGCTGCATGAAGCAACGAATGGATTCACTAGGATTCTTGGTAAGGGATCTTCAGGCAAAGTCTTCAGTGGAACTTTAATAATAGAAGATGCAGAAATTGGTATTGCAGTAAAGAAACTGGAAAAGAATGTTGAGAAAAGTGACAGTGAGTTCATGACTGAGCTCAAAATTATTGGCCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCATTGAGAATAACCATAGACTTCTTGTGTATGAGTTGATGCCAAACGGAGCACTGTCCAGTGTTTTGTTTAGAGAGGGAGGAAGACCACATTGGGGTCAAAGGATTGAAATGGCTCTTGGCATTGCAAGGGGCTTACTATACTTGCACGAAGAGTGTGAGACCCAGATCATACATTGTGATATCAAGCCCCAAAATGTGTTGCTTGATGCCAATCACACCGCAAAGATAGCAGATTTTGGGCTTTCCAAGCTTTTGAAAAAAGATCAAAGCAGAACAAGCACTAATTTACGAGGGACAATAGGGTATATAGCACCTGAGTGGCTAAGAAGTGCACCAATAACCGCCAAAGTTGACATATACAGCTTTGGGGTTATGTTACTAGAGATTATTTGCTGCAGGAGGCACATTGAGTCGTGCCAAGATGACATAGATAGCCTAGAGGATGATTTGGTTCTTTCGAATTGGGTTTTAAGATGCATGGTGTCTAGGAAACTAGAGCAAGTAGTGAGGCATGATTCAGAAGTGCTCAATGATTTCCAGAGATTTGAACAAATGGCCTTGGTTGGATTATGGTGTGTTCATCCAAACCAAGCTCTTAGACCTTCAATGAAGCAGGTCACACAAATGCTGGATGGAACCCTGGAAGTTGGGGTTCCTCCTTTGCTTTATGATCAGATGATGGCAAATTCAGATCAGGGATTATAG	2373	0.4138	MSLAMFLPFILALVLHLNGLHAQNSMAIALNTSITAGSNSTWKSPSGDFEFGFHRLPTGLFLVGIWFGKIQEITFVWYHSPPVEPSSLIDFTSLGHLVVTHPNGSIAQTIYDGGSTATSAHMQDDGNFVMKDSNLGSVWESFNSPANTILPGQTLQSNQILYSKGKGTSNYSMGNFMLQMQGDGNLVLKAYKWSDPAYWYTLTTSFPNANLVFDATTASLYLVSGSRNIFNVTNKAPTPVNDYYHRATIDENGNFHQYAYHKRNGTEWRNVWKAVEDPCRVDAVCGVYGLCTSPDNESVKCDCIQGYIPLDQEDLSKGCHPAAVINYCAEPSVMNFKVQVFEDTDFQFYPDFSHQTEVDLEGCKKSVMEDCNIIAATYNASTFTCAKKSMPLLNARRSSSSKGQKALLKVPNSVESRISKVSKKKRFNVRVFLKVMLAVSATFACFFGALAVYYHPFAQRLTRRRKSLNAAAIGINFREFTFQELHEATNGFTRILGKGSSGKVFSGTLIIEDAEIGIAVKKLEKNVEKSDSEFMTELKIIGRTHHRNLVRLLGFCIENNHRLLVYELMPNGALSSVLFREGGRPHWGQRIEMALGIARGLLYLHEECETQIIHCDIKPQNVLLDANHTAKIADFGLSKLLKKDQSRTSTNLRGTIGYIAPEWLRSAPITAKVDIYSFGVMLLEIICCRRHIESCQDDIDSLEDDLVLSNWVLRCMVSRKLEQVVRHDSEVLNDFQRFEQMALVGLWCVHPNQALRPSMKQVTQMLDGTLEVGVPPLLYDQMMANSDQGL*	791

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g0389	790	ProSitePatterns	Protein kinases ATP-binding region signature.	496	522	IPR017441	GO:0005524
	Apr7g0389	790	SMART	blect_4	33	145	IPR001480	-
	Apr7g0389	790	Gene3D	Transferase(Phosphotransferase) domain 1	569	772	-	-
	Apr7g0389	790	Gene3D	-	145	287	-	-
	Apr7g0389	790	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	3	778	-	-
	Apr7g0389	790	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	612	624	IPR008271	GO:0004672\|GO:0006468
	Apr7g0389	790	Gene3D	Phosphorylase Kinase; domain 1	464	568	-	-
	Apr7g0389	790	SUPERFAMILY	alpha-D-mannose-specific plant lectins	61	201	IPR036426	-
	Apr7g0389	790	SUPERFAMILY	Protein kinase-like (PK-like)	470	766	IPR011009	-
	Apr7g0389	790	ProSiteProfiles	Protein kinase domain profile.	490	770	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g0389	790	SMART	serkin_6	490	770	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g0389	790	PIRSF	SRK	1	788	IPR024171	GO:0004674
	Apr7g0389	790	Gene3D	-	22	144	IPR036426	-
	Apr7g0389	790	Pfam	Protein kinase domain	494	764	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr7g0389	790	Pfam	S-locus glycoprotein domain	241	309	IPR000858	GO:0048544
	Apr7g0389	790	PANTHER	SERINE/THREONINE-PROTEIN KINASE	3	778	-	-
	Apr7g0389	790	Pfam	D-mannose binding lectin	81	160	IPR001480	-
	Apr7g0389	790	ProSiteProfiles	Bulb-type lectin domain profile.	27	143	IPR001480	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr7g0389	Apr-Chr7	10044084	10046735	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr7g0389	423	772	Receptor kinase-like Gene Family	AT2G43700	36.080	4.32e-66	229

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Apr7g0389		Pkinase	7.3e-49	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr7g0389	-		-	lang:109330973	1212.59