Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0372 ATGGGTACGACGCTACAAACTGTTGTGACTGTGGTTCTTCTCCTTATGTTTCTTCTCATCATCATCTTCCTCTTTTTTCTCTTCAAACCATGGCGCTTCTTCTGCTCTTCGCGTTTCCGCTCCTTCATTAAGGGCGAGCTAGAGAGGCCTCTCGTTCCTAACGTAGATGATGCGGATGCGTCACCGTGTAATCAGAGCAATGAATTGCCTCGTGATTATGATCTTGAGGGTGCTTGTTATCCCAACGAAGCTCATTTTCCTCGAACCCATGGTCAAGGACTTGTTCATAAGCAAAGGCTTCAGACACTTCCTATTTCATCTAACATGCCACAAGGTGGTGGGGATACACTCGTCGTCGATGTCATCTCTGAACCTTCTTCCGAAGATGTTGATGTTGGTCAAACACTTAAGTTCCAAACAGCTCATGTAGCTCAAATTGTAAAGCATGACACACCCAATTTTCAGAATGATAGAGTGCAAGACTTTGTGCAGAAAGATATATCTGATCAAAGAACTTGCCTCACTTTGGAGGTTATAAGTGGACCTTCTCGGGGACTTCGTTGTTCTGTTCAGTCAACCAATCCCTCTCGTCTGCCGCTAACTTTGGGAAGAGTTTCTCCCAGTGATTTGTTGATAAAGGATTCAGAAGTGTCGGGAAAGCATGCGTTGATAAAGTGGAATTTGGATAGAATGAAATGGGAGTTGGTAGATATGGGCAGTCTGAATGGAACACTATTGAATTCTAAGCCAATCAACCATCCTGACACTGGAAGTAGGCATTGGGGAGATCCAATGAATCTTGCTAATGGAGATATCATAACTCTTGGAACAACATCACAAGTTGTTGTCCATATTACTTCACAAAATCAGCATCACATTCCATTTGGAGTTGGTATGGCATCAGAACCAATGGCTTTGCGTCGAGGAGGGAAAAAGCTTCCTATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGGTTGGATCAGTTTGGACTATTCGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCTGAGATAATTGCTACTATATTATCGGATTCCTTAAAAAGGGAGAGGGTTTTATCTCTCTGTGATGCTTCAGATATCCTTCGCGATGCATTTTGTCAAACAGAAGCATGCATGAATCACTATTATGAGGGGTGTACAGCAACAGTACTTCTGGTGTGGAGTGATGGTGACGAAAATTTCTTTGCACAATGTGCTAATGTTGGAGACTCTGCCTGCTTCATGAGTGTTAATGGGAAACAAATCAAGATAACAGAGGATCATAAGATAACGAATCATTCTGAGAGACTCAGAATTGAAGGGTCAGGTGAACCATTAAAAGATGGGGAAACACGTCTATATGGTATGAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAGCAGCAGGATTCCCGGTTCAGTTCAGAACCTTATATAAGTCAAGTTGTGCATATTAATCAAGCTAGCAAGGCTTTTGCTGTTCTAGCTAGTGATGGGTTATGGGATGTTGTCAGCGGGAAGAAGGCAATTCAACTAGTGTTTCAGACAAAGGAGAGATACTATTCAGAGAGAGAGAATGCAGCAGAAAAGATTGCTAGTTTGTTGTTGAATGAGGCTAAAACACTCAGAACAAAGGATAATACTGCTGTAATTTTCTTAGATTTTGATACCTTTAACAGATTCTCTTGTAAAGTTGAATCCTAG 1743 0.4211 MGTTLQTVVTVVLLLMFLLIIIFLFFLFKPWRFFCSSRFRSFIKGELERPLVPNVDDADASPCNQSNELPRDYDLEGACYPNEAHFPRTHGQGLVHKQRLQTLPISSNMPQGGGDTLVVDVISEPSSEDVDVGQTLKFQTAHVAQIVKHDTPNFQNDRVQDFVQKDISDQRTCLTLEVISGPSRGLRCSVQSTNPSRLPLTLGRVSPSDLLIKDSEVSGKHALIKWNLDRMKWELVDMGSLNGTLLNSKPINHPDTGSRHWGDPMNLANGDIITLGTTSQVVVHITSQNQHHIPFGVGMASEPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIIATILSDSLKRERVLSLCDASDILRDAFCQTEACMNHYYEGCTATVLLVWSDGDENFFAQCANVGDSACFMSVNGKQIKITEDHKITNHSERLRIEGSGEPLKDGETRLYGMNLARMLGDKFLKQQDSRFSSEPYISQVVHINQASKAFAVLASDGLWDVVSGKKAIQLVFQTKERYYSERENAAEKIASLLLNEAKTLRTKDNTAVIFLDFDTFNRFSCKVES* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0372 580 PANTHER PROTEIN PHOSPHATASE 2C 70 34 579 - -
Apr7g0372 580 Pfam Protein phosphatase 2C 309 561 IPR001932 -
Apr7g0372 580 ProSiteProfiles Forkhead-associated (FHA) domain profile. 200 251 IPR000253 GO:0005515
Apr7g0372 580 ProSitePatterns PPM-type phosphatase domain signature. 333 341 IPR000222 GO:0043169
Apr7g0372 580 Gene3D - 304 576 IPR036457 -
Apr7g0372 580 ProSiteProfiles PPM-type phosphatase domain profile. 296 568 IPR001932 -
Apr7g0372 580 SUPERFAMILY SMAD/FHA domain 172 283 IPR008984 GO:0005515
Apr7g0372 580 SMART FHA_2 199 251 IPR000253 GO:0005515
Apr7g0372 580 PANTHER PROTEIN PHOSPHATASE 2C 34 579 IPR015655 GO:0004722|GO:0006470
Apr7g0372 580 SMART PP2C_4 290 566 IPR001932 -
Apr7g0372 580 SUPERFAMILY PP2C-like 309 569 IPR036457 -
Apr7g0372 580 CDD FHA 174 279 IPR000253 GO:0005515
Apr7g0372 580 Pfam FHA domain 201 276 IPR000253 GO:0005515
Apr7g0372 580 CDD PP2Cc 308 568 IPR001932 -
Apr7g0372 580 Gene3D - 168 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0372 Apr-Chr7 9645259 9654441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0372 26 570 PP2C-type Phosphatase Gene Family AT5G19280 56.370 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0372 K01090 - gmx:100170642 928.702