Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0366 ATGTTTCACACAAACATGTTTGATTCTCACCAACACATGCTTGACATGTCATCAACCCATAAGACTTTCTGTGAGAGTGATTTGGGAAAGGCAAGAGATGATGAGTACGAGAGCAAATCTGGCACCGAGACCATGGACGCTCATTCCAGCGATGACCAAGAGCCCAACCAACGTCCCAACAAGAAGGGGTACCACCGCCACACACAGCGCCAAATTCAAGAAATGGAAGCCTTCTTCCAGCAGTGTCCTCATCCAGATGACAAGCAAAGAAAAGAACTGAGCCGGGAACTTGGGCTAGAACCTTTGCAAGTTAAGTTTTGGTTCCAAAACAAGCGCACCCAGATGAAAGCTCAACATGAACGACATGAGAATACTATTTTGAAAGCAGAGAATGAGAAGCTTCGTGCCGAGAACAATAGGTACAAGGAGGCCCTAACCAATGCAACATGTCCCAACTGTGGAGGCCCTGCTACTCTTGGCGAAATGTCCTTCGACGAGCAACATTTGAGGATTGAGAATGCTCGATTAAGAGAAGAGATTGATAGGATTTCAGGAATTGCAACCAAATACGTTGGAAAGCCCGTGACTTCGTATTCAAACCTTTCATCTCATAATAACAATCACGTGCCTGTTGGTAACTACGGAGCACAGTCAGGGATGGTAGGAGAAATGTATGGTGGTAGCGACCTTCTTAGGTCACTTCCAGCACCTGCTGATGCTGACAAACCCATGATTGTGGAGCTCGCCGTTGCAGCAATGGAGGAACTAACAAGATTGGCTCAGGTGGGTGACCCTTTATGGGTCCCCAACAACCACCGTACTGAGATTCTTAATGAAGATGAATATTTGAGGTCTTTCCCTAGAGGAATAGGTCCCAAGCATGTGGGCTTAAGATCTGAAGCTTCAAGAGAATCCACTGTGGTTATCATGAATCATATGAATCTTGTCGATATCCTTATGGATGTGAACCAATGGTCAACTGTGTTTTGCGGCATTGTTTCGAGAGCGTTGACGCTTGAAGTGCTTTCAACTGGAGTCGCAGGAAACTACAACGGAGCCTTGCAAGTGATGTCAGCTGAGTTCCAGGTACCTTCACCACTTGTTCCAACTCGTGAGAACTATTTCGTAAGGTACTGTAAGCAGCACCCAGATGGGATATGGGCCGTGGTGGATGTTTCCTTGGATAATCTGCGACCCACCACAATCTCGAGAAGCCGAAGAAGGCCCTCTGGTTGTTTAATTCAAGAATTACCAAATGGATACTCGAAGGTTACATGGATTGAACATGTAGAAGTGGATGATAGAGCTGTGCATAATATATATAAACCTCTTGTTAATTCCGGGCTTGCCTTTGGTGCTAAACGCTGGGTGGCTACATTAGATAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAATTACATACCTGCAGGGGACCTTTGTGTGATAACGAGTCCTGAGGGAAGGAAAGGTATGCTGAAGCTGGCGGAGAGAATGGTGATTAGCTATTGTAGTGGAGTTGGTGCTTCTACAGCACATGCTTGGACAACGCTATCTGCAACTGGGTGCGATGATGTAAGGGTGATGACCAGGAAGAGTACGGATGACCCAGGAAGACCACCCGGTATAGTGCTCTGTGCTGCCACTTCTTTCTGGCTTCCGGTTCCTCCAAAGAGGGTTTTTGATTTCCTTCGTGATGAAAACTCTAGAAATGAGTGGGACATTCTCTCCAATGGAGGTTTAGTTCAAGAAATGGCACACATAGCAAATGGCCGTGATCCTGGCAACTCTGTCTCTTTACTTCGAGTCAATGGTACAAATTCGAGCCAAAGTAATATGCTGATACTTCAAGAGAGTTGCACTGATTCTACCGGCTCATATGTAGTTTATGCTCCTGTTGATATCGTTGCCATGAATGTAGTATTGAGTGGAGGGGATCCAGATTATGTTGCCCTGCTTCCCTCGGGCTTTGCTATTCTTCCTGATGGGCCTGGATCAAACGGAGGAGCAGTACTTGATGTTGGATCTGGAGGTTCTCTGCTTACAGTTGCATTTCAGATCTTAGTTGATTCAGCCCCAACAGCAAAGCTATCTCTAGGTTCAGTGGCCACTGTTAACAGTTTAATTAAGTGCACAGTTGAAAGGATCAAAGTTGCAGTCATACGAGACGGCACCTAA 2178 0.4605 MFHTNMFDSHQHMLDMSSTHKTFCESDLGKARDDEYESKSGTETMDAHSSDDQEPNQRPNKKGYHRHTQRQIQEMEAFFQQCPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKAQHERHENTILKAENEKLRAENNRYKEALTNATCPNCGGPATLGEMSFDEQHLRIENARLREEIDRISGIATKYVGKPVTSYSNLSSHNNNHVPVGNYGAQSGMVGEMYGGSDLLRSLPAPADADKPMIVELAVAAMEELTRLAQVGDPLWVPNNHRTEILNEDEYLRSFPRGIGPKHVGLRSEASRESTVVIMNHMNLVDILMDVNQWSTVFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKQHPDGIWAVVDVSLDNLRPTTISRSRRRPSGCLIQELPNGYSKVTWIEHVEVDDRAVHNIYKPLVNSGLAFGAKRWVATLDRQCERLASSMANYIPAGDLCVITSPEGRKGMLKLAERMVISYCSGVGASTAHAWTTLSATGCDDVRVMTRKSTDDPGRPPGIVLCAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGLVQEMAHIANGRDPGNSVSLLRVNGTNSSQSNMLILQESCTDSTGSYVVYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGPGSNGGAVLDVGSGGSLLTVAFQILVDSAPTAKLSLGSVATVNSLIKCTVERIKVAVIRDGT* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0366 725 ProSitePatterns 'Homeobox' domain signature. 93 116 IPR017970 GO:0000981|GO:0006355
Apr7g0366 725 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 22 722 - -
Apr7g0366 725 Gene3D - 305 470 IPR023393 -
Apr7g0366 725 Pfam START domain 248 466 IPR002913 GO:0008289
Apr7g0366 725 SUPERFAMILY Homeodomain-like 45 118 IPR009057 -
Apr7g0366 725 SMART HOX_1 60 122 IPR001356 GO:0003677
Apr7g0366 725 SMART START_1 247 466 IPR002913 GO:0008289
Apr7g0366 725 CDD START_ArGLABRA2_like 242 465 - -
Apr7g0366 725 CDD homeodomain 61 119 IPR001356 GO:0003677
Apr7g0366 725 Coils Coil 112 147 - -
Apr7g0366 725 MobiDBLite consensus disorder prediction 32 69 - -
Apr7g0366 725 Pfam Homeodomain 61 116 IPR001356 GO:0003677
Apr7g0366 725 ProSiteProfiles 'Homeobox' domain profile. 58 118 IPR001356 GO:0003677
Apr7g0366 725 Gene3D - 45 134 - -
Apr7g0366 725 SUPERFAMILY Bet v1-like 239 468 - -
Apr7g0366 725 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 722 IPR042160 -
Apr7g0366 725 ProSiteProfiles START domain profile. 238 469 IPR002913 GO:0008289
Apr7g0366 725 SUPERFAMILY Bet v1-like 486 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0366 Apr-Chr7 9457695 9461236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0366 1 724 Homeobox Transcription Factor Family AT4G21750 76.832 0.0 1191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Apr7g0366 START 4.6e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0366 K09338 - gmx:100815499 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0366 7 9457695 9461236 Apr8g2352 8 33908880 33915892 PCT