Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0363 ATGGCTCCCCAACAATCTCTGTTAAACAAGCCTACAAAATCCCATTTCAAAACTATCTTCTTAGTCGTCTCCATAGCTGCTGTCATAAGCTCATCAGCCCTTATTGCTTCTTACTTCATCAATCCCACCTCTTTCTTCAACCTCTCCTCACCAAACCATCTCTGTGATCATGCTCTTGATACTGCATCCTGCTTGGCACATGTCTCTGAAGTAGCTCAAGGTCCTTTCTTGAGCACCCCCACAAAAGACCACAAATACAATTTGCTGCACTCCTTCCTAATGAAGTCCAATTCACACATTCAGAATGCTATGGACACAGCCAAAGCTATTAAACAAAGGATCAACAATCCGAGGGAGGAAGCAGCCTTGCGGGACTGCGAGGAACTGATGGAGTTGTCGATGGACAGAGTTTGGGACTCAATGGTGGCTCTCACTAAAGACACCACTGATTCTCAGCAAGATGCACACACGTGGCTAAGCAGCGTCCTCACTAACCATGCAACTTGCTTGGATGGATTAGAGGGCACCGCTAAGGCCCTTATGGAGGCTGAGCTAAAGGACTTGATCTCGAGAGCAAGAACCTCTCTGGCCATGCTTGTTGCTGTTTTGCCAAAGGACCAAAAACTCATTGAAGAGCCACTAAATGGGGACTTTCCTTCATGGGTGACAAGCAAAGATAGGAAGCTTTTGCAGTCTTGGGGTGGGGATATTCAGGCCAATGTTGTGGTGGCTGCAGATGGGAGTGGCAAGTTCAAGACTGTGGCAGAGGCCGTGGCATCCGTACCCGACAAGCATAAGACGAGGTACGTCATTTACGTGAAAAAGGGAACGTACAAAGAGAACGTTGAAATTGGTAGCAAAAAGTGGAACGTGATGCTGGTGGGCGACGGTATGGATTCAACTATTATCACCGGCAGCTTGAATCACGTCGACGGAACAGGCACCTTCCAAACTGCCACTGTTGCGGCGGTGGGCGATGGATTCATAGCCCAAGATATTAGGTTCCAAAACACAGCAGGGCCACAGAAGCACCAGGCAGTGGCTCTCCGGGTGGGGGCGGACCGGTCCGTCATAAACCGGTGTCGCATAGACGCCTATCAAGACACTCTTTATGCCCACTCGAACAGGCAATTCTACCGTGATTCCTTCATCACCGGCACCATTGACTTCATCTTTGGAAACGCAGCTGTTGTGTTACAAAAGTGCAAGCTGGTGGCCCGAAAGCCCATGGCTAACCAGAAGAACATGGTGACGGCCCAAGGAAGAGATGATCCAAACCAGAACACAGGAACTTCAATTCAGCAATGTGATGTAATTCCAAGCACCGATCTTAAGCCTGTGATGGACTCCATTCCAACTTTCCTGGGCCGCCCGTGGAAGAATTTCTCCAGAACCGTTGTGATGCAATCGTTGCTGAGCAACCATATTGACCCAGCTGGATGGGCCGAATGGGATGACAAGAGTAAGGACTTTTTGTACAAGTTGTATTACGGAGAGTATATGAATAAGGGGCCAGGTGCTGGTACCGCCAAGAGGGTGAATTGGCCTGGTTACCATATCATCACAAGTGAAGCCGAAGCCTCCAAGTTCACCGTAAAACAGTTCATCCAAGGTGATGTATGGTTGAAGAACACTGGGGTCAACTACATTGAGGGCCTCTAG 1662 0.4892 MAPQQSLLNKPTKSHFKTIFLVVSIAAVISSSALIASYFINPTSFFNLSSPNHLCDHALDTASCLAHVSEVAQGPFLSTPTKDHKYNLLHSFLMKSNSHIQNAMDTAKAIKQRINNPREEAALRDCEELMELSMDRVWDSMVALTKDTTDSQQDAHTWLSSVLTNHATCLDGLEGTAKALMEAELKDLISRARTSLAMLVAVLPKDQKLIEEPLNGDFPSWVTSKDRKLLQSWGGDIQANVVVAADGSGKFKTVAEAVASVPDKHKTRYVIYVKKGTYKENVEIGSKKWNVMLVGDGMDSTIITGSLNHVDGTGTFQTATVAAVGDGFIAQDIRFQNTAGPQKHQAVALRVGADRSVINRCRIDAYQDTLYAHSNRQFYRDSFITGTIDFIFGNAAVVLQKCKLVARKPMANQKNMVTAQGRDDPNQNTGTSIQQCDVIPSTDLKPVMDSIPTFLGRPWKNFSRTVVMQSLLSNHIDPAGWAEWDDKSKDFLYKLYYGEYMNKGPGAGTAKRVNWPGYHIITSEAEASKFTVKQFIQGDVWLKNTGVNYIEGL* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0363 553 PANTHER PECTINESTERASE 20 551 - -
Apr7g0363 553 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Apr7g0363 553 TIGRFAM PME_inhib: pectinesterase inhibitor domain 53 184 IPR006501 GO:0004857
Apr7g0363 553 SMART PMEI_2 46 198 IPR006501 GO:0004857
Apr7g0363 553 CDD PMEI-like_4 57 202 - -
Apr7g0363 553 Gene3D Invertase/pectin methylesterase inhibitor family protein 52 202 IPR035513 -
Apr7g0363 553 PANTHER PECTINESTERASE 20 551 - -
Apr7g0363 553 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 198 IPR035513 -
Apr7g0363 553 Gene3D - 234 553 IPR012334 -
Apr7g0363 553 Pfam Pectinesterase 240 539 IPR000070 GO:0030599|GO:0042545
Apr7g0363 553 Pfam Plant invertase/pectin methylesterase inhibitor 52 191 IPR006501 GO:0004857
Apr7g0363 553 SUPERFAMILY Pectin lyase-like 238 552 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0363 Apr-Chr7 9438530 9441099 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0363 5 553 Carbohydrate Esterase AT1G11580 54.011 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0363 K01051 - gmx:100815836 865.144