Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0359 ATGGCTACCCAGCAATCTTTGTTAGACAATAAGCCTAGAAAATCCCTTTCCAAAAACATTTGGTTAATCACCTCTGTCTTTGTTGTCATAAGCTCATCAGCCCTTATTGCTTCTTACTTCATCAATCCCACCTCTTTCTTCAACCCCTCTTCACCTCACCATGTCTGTGATCATGCACTTGATACTTCATCTTGCTTAGCGCATGTCTCTGAAGTAGCTCAAGGTTCTTTCTTGAGTACCCCAACAAAAGACCACAAATACAATTTGCTTCACTCCTTCCTAATGAAGTCCAATTCACACATTCAGAATGCTATGGACACAGCTAAAGCTATCAAACAAAGGATCAACAATCAGAGAGAGGAAGCAGGTTTGGGGGACTGCGAGGAGCTGATGGAGTTGTCGGTGGAACGAGTTTGGGACTCAATAGTGGCTCTAACAAAAGACAGCACTGTTTCTCAGCAAGATGCACACACGTGGCTAAGCAGTGTCCTCACTAACCATGCAACTTGCTTGGATGGGTTAGAGGGCCCAGCTAAGGCCCTTATGGAGGCTGAACTTCAGGAGTTGATGTCAAGAGCAAGAACTTCTCTGGCGATTCTTGTTGCTGTTTTGCCAAAGGGCCAACAACTAATTGAAGAGTCACTAAATGGGGACTTTCCTTCATGGGTTACCAGAAAAGATAGGAGGCTTTTGGAGTCTACGGTTGGGGATATTCAGGCTAATGTTGTGGTTGCTACGGATGGGAGTGGCAAGTTCAAGACTGTGGCAGAGGCCGTGGCTTCCGCACCCGACAACGGTAAGACGAGGTATGTTATTTACGTGAAAAAGGGAACGTACAAAGAGAACGTTCAAATTGGTCCGAAGAAGACGAACGTGATGCTCGTGGGTGATGGTATGGATGCAACTGTAATCACCGGCAGCTTGAATTTTGACGATGGAACAAGCACCTTCAACTCTGCCACCGTTGCTGCCGTGGGCGATGGATTCATAGCCCAAGACATTTGGATCCAGAACACAGCGGGCCCACAGAAGCACCAAGCAGTGGCTCTTCGTGTGGGTGCTGACCAGTCCGTCATAAACCGTTGCCGCGTCGACGCTTATCAAGACACTCTCTATGCCCATTCCAACAGGCAATTCTACCGTGATTCCTTCATAACTGGCACCGTTGACTTCATATTTGGAAACGCAGCCGTTGTTTTCCAAAAGTGCAACCTGGTAGCCCGAAAGCCCATGAGTAATCAAAACAACATGGTTACAGCCCAAGGACGAGAAGACCCAAACCAAAACACTGGAACTTCAATTCAGCAATGTAACCTAACACCAAGCTCGGATCTTAAGCCTGTGGTGGGGTCCATCAAAACCTTTCTGGGCCGCCCATGGAAGAAGTTTTCAAGAACAGTTGTGATGCAGTCGTCACTGGACAGCCATATTGACCCAACAGGATGGGCCGAATGGGATGCCCAAAGTAAGGACTTCTTGCAAACGTTGTATTATGGAGAGTATATGAACAGCGGGCCAGGTGCTGGCACCGCCAAGAGAGTGAAGTGGCCTGGTTACCATATCATCACAAGTGCAACGGAGGCCAGCAAGTTTACAGTAACACAGCTCATCCAAGGTAACGTTTGGTTGAAGAACACTGGTGTGAACTTCATCGAAGGCCTTTAA 1665 0.4745 MATQQSLLDNKPRKSLSKNIWLITSVFVVISSSALIASYFINPTSFFNPSSPHHVCDHALDTSSCLAHVSEVAQGSFLSTPTKDHKYNLLHSFLMKSNSHIQNAMDTAKAIKQRINNQREEAGLGDCEELMELSVERVWDSIVALTKDSTVSQQDAHTWLSSVLTNHATCLDGLEGPAKALMEAELQELMSRARTSLAILVAVLPKGQQLIEESLNGDFPSWVTRKDRRLLESTVGDIQANVVVATDGSGKFKTVAEAVASAPDNGKTRYVIYVKKGTYKENVQIGPKKTNVMLVGDGMDATVITGSLNFDDGTSTFNSATVAAVGDGFIAQDIWIQNTAGPQKHQAVALRVGADQSVINRCRVDAYQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPMSNQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSIKTFLGRPWKKFSRTVVMQSSLDSHIDPTGWAEWDAQSKDFLQTLYYGEYMNSGPGAGTAKRVKWPGYHIITSATEASKFTVTQLIQGNVWLKNTGVNFIEGL* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0359 554 CDD PMEI-like_4 58 203 - -
Apr7g0359 554 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Apr7g0359 554 PANTHER PECTINESTERASE 21 552 - -
Apr7g0359 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 54 199 IPR035513 -
Apr7g0359 554 Gene3D - 235 554 IPR012334 -
Apr7g0359 554 SUPERFAMILY Pectin lyase-like 239 553 IPR011050 -
Apr7g0359 554 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Apr7g0359 554 PANTHER PECTINESTERASE 21 552 - -
Apr7g0359 554 SMART PMEI_2 47 199 IPR006501 GO:0004857
Apr7g0359 554 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 191 IPR006501 GO:0004857
Apr7g0359 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 203 IPR035513 -
Apr7g0359 554 Pfam Plant invertase/pectin methylesterase inhibitor 53 198 IPR006501 GO:0004857
Apr7g0359 554 Coils Coil 101 121 - -
Apr7g0359 554 Pfam Pectinesterase 241 540 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0359 Apr-Chr7 9312343 9314265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0359 1 554 Carbohydrate Esterase AT1G11580 54.610 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0359 K01051 - gmx:100815836 907.131