Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0348 ATGATTCATTCTCTAATTGTTTCCAAATCCATTCCATTCTTCCTTCTTCTTTGTACTCTTGCTTTTCTATTAGATGTTGCTTTTGCTGATCCTCCATATGAAATTTGTTCCACAAGCAGCAGCTATGCAAACAACAGCACCTTTCAAAACAATCTAGTCAACCTTCTCTCCTATTTATCCTCCAATGGTTCAATCTCCAAATCCTATAACGCTTCTTATGGAATTGGCCCAGATAGAGTTTATGGCCTCTACATGTGCCTAGACTATGATTCAAATGAATCTTGTAAAAAATGCATAACCACAGCAATTGAGGACATTGTCAAACTCTGTCCTCAAGCAGAAGAAGCAATAGTATGGGAGGAGGTCTGCCAATTACGTTATTCCAACAACAATTTCATGGGTATGTTGAATGTCACAGGGAACATTGGCTTAGATAATAAACTGAATATTTCAGAACCAGAAAAATTAGAGTCTGCTGTGAATGAGATATTAAGTAATCTAACTGAGATGGCATCTTTTAATGTTTCGGCTAACAATTATGCAACTGGAGAAGTCCCCTTTGAAGATAAAACAATATATGCCTTGGTGCAGTGCACTAAGGATTTATCAGCCAATGATTGCAGTAGGTGCCTGCAAAATGCCACAAAAGATATACCAGGTTGTTGCTATGCCTCCATCGGTGCAAGAGTTCTGAGTCGTAGCTGTTATTTGAGGTATGAATTTTATCCGTTTTATCTTGGTGCAACAGAACCCACAGGTTCTCCAACCAGAAATAATGAAGGCAAAAGTAAGCATTTCAAGTCAATTTCATATAATTCAAGCAAAATATGGATGATTACAGGCATTATAGTTGCGGTAGGCTTGGTGATAATATCTGTCACTTGCTGCCTATACTTTGTCAGGACCAAAAGAAATAAACAAAGAACAAATGACAAAATATCTGAGGACTTCCCTTATATTGATCTTGGATCTCTCTGTGTGGCTACCAAAAACTTTTCTGATTTAAATAAGCTTGGACAAGGTGGCTTTGGCCCTGTTTACAAGGGAATACTTAGTGATGGCCAGGAAGTAGCAATCAAGAGGCTATCAACTTGCTCTGAGCAAGGCTCCGAGGAATTCATAAACGAGGTTCTGTTGATAATGAAACTTCAACACAAAAATCTTGTAAAGCTTCTGGGATTTTGTGTAGATGGAGAAGAGAAAATTCTGGTGTATGAATTTTTACCCAATGGTAGTCTTGATGTTGTACTTTTTGATCCAAAGGAACGTGCACAACTCGATTGGACCAAACGCCTCGATATAATAAATGGCATAGCAAAGGGAATTCTTTATCTTCACGAAGATTCTCGACTGAAAATAATTCATAGAGATCTAAAAGCAAGTAATGTGTTGTTGGACTATGACATGAATCCAAAGATCTCAGACTTTGGAATGGCCAGGATATTTGCTGGAAATGAAGATGAAGCTAACACTGCAACAATAGTTGGCACATATGGATATATGGCTCCAGAGTATGCAATGGAGGGGCTATATTCCATAAAGTCTGATGTTTTCGGCTTTGGAGTACTATTGCTTGAGATCATTACAGGGAAACGTAACGCGAGTTTCTATCACTCTAAAAACACTCCTAGCCTTCTATCATATGCATGGCATCAATGGAATAATGGGAAGGGGCTGGAATTAAGGGATCCCTTGTTATCTGATTCGTGCCCCGAAGATGAGTTTCTGAGATACGTGAATATTGGATTGCTATGTGTTCAAGAAGATGCATATGATAGGCCAACCATGTCTTCCGTTGTTTTGATGTTGAAGAACGAATCAGCAACGCTTGGCCAACCAGAAAGACCACCTTTCTCTGTAGGGAGATTCAATGCTAGTGAGCCAGATTGCCAAGATTGCTCAGTTAATTTCTTAACCGTGTCAGATATATTGCCGCAGTGA 1941 0.39 MIHSLIVSKSIPFFLLLCTLAFLLDVAFADPPYEICSTSSSYANNSTFQNNLVNLLSYLSSNGSISKSYNASYGIGPDRVYGLYMCLDYDSNESCKKCITTAIEDIVKLCPQAEEAIVWEEVCQLRYSNNNFMGMLNVTGNIGLDNKLNISEPEKLESAVNEILSNLTEMASFNVSANNYATGEVPFEDKTIYALVQCTKDLSANDCSRCLQNATKDIPGCCYASIGARVLSRSCYLRYEFYPFYLGATEPTGSPTRNNEGKSKHFKSISYNSSKIWMITGIIVAVGLVIISVTCCLYFVRTKRNKQRTNDKISEDFPYIDLGSLCVATKNFSDLNKLGQGGFGPVYKGILSDGQEVAIKRLSTCSEQGSEEFINEVLLIMKLQHKNLVKLLGFCVDGEEKILVYEFLPNGSLDVVLFDPKERAQLDWTKRLDIINGIAKGILYLHEDSRLKIIHRDLKASNVLLDYDMNPKISDFGMARIFAGNEDEANTATIVGTYGYMAPEYAMEGLYSIKSDVFGFGVLLLEIITGKRNASFYHSKNTPSLLSYAWHQWNNGKGLELRDPLLSDSCPEDEFLRYVNIGLLCVQEDAYDRPTMSSVVLMLKNESATLGQPERPPFSVGRFNASEPDCQDCSVNFLTVSDILPQ* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0348 646 CDD STKc_IRAK 338 605 - -
Apr7g0348 646 Pfam Salt stress response/antifungal 151 241 IPR002902 -
Apr7g0348 646 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Apr7g0348 646 SMART serkin_6 332 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0348 646 ProSiteProfiles Gnk2-homologous domain profile. 138 244 IPR002902 -
Apr7g0348 646 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 66 643 - -
Apr7g0348 646 Gene3D - 31 132 IPR038408 -
Apr7g0348 646 Gene3D - 142 244 IPR038408 -
Apr7g0348 646 ProSiteProfiles Gnk2-homologous domain profile. 30 132 IPR002902 -
Apr7g0348 646 Gene3D Transferase(Phosphotransferase) domain 1 408 613 - -
Apr7g0348 646 ProSiteProfiles Protein kinase domain profile. 332 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0348 646 SUPERFAMILY Protein kinase-like (PK-like) 315 629 IPR011009 -
Apr7g0348 646 Pfam Protein tyrosine and serine/threonine kinase 336 601 IPR001245 GO:0004672|GO:0006468
Apr7g0348 646 Gene3D Phosphorylase Kinase; domain 1 294 407 - -
Apr7g0348 646 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 66 643 - -
Apr7g0348 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0348 Apr-Chr7 9211242 9213777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0348 20 618 Receptor kinase-like Gene Family AT4G05200 43.084 4.80e-172 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g0348 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0348 - - gmx:102669364 1013.45