Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0347 ATGGTCAAAGATAGACCTTCACCTGTGCTTTTGTGCATCATACTTTTGTTATCTATCAACAGGGTTTCTTGTGCAGACCCTATTGATACTTATTGTTCAAGTGAATTCCCAACTTACACCCCCAATAGTTCATTCCACAATAACCTCAAGCTTGTTTTGGAGTTGCTTTCCTCCAACAACGCTTCAAAGACGGGTTTCTATAACACATCTGTAGGAGAAGGGTCAAACAAAGTGTATGCACAAGCACTTTGCAGAGGGGACATCACCAACTCGACAGTATGCAAAGAATGCGTTGAGAAAGCAAGCCAAGATATAATGAATGAGTGTAAGAGTGAAGATGCAATAATATGGTATGAGCTTTGCCAAGTTCGGTACTCCTTTCAGATGTTTTTCTCAAGCATGGTTTATACTGGAAAGTATCCAAAGCAAAATGATCAAGAGAAGAATGTCTCAGACCCTGTTCGATTTGATGAATTATTGATGTATTTAATGAAAAATATCTCATATGACGCTGCTTTTAATCCCGCTAAGAACATGTTTGCATCAGGGGAAATTGACTTTCCTGGAAAGAAAACAATTTATGGTCTAGTCCAATGTACCAGGGACATTTCTGAAACAGATTGTAATAGTTGTTTGAATTCTGCGTTGACAGAACTTCTTGCATGTTGCTCCTACCGGGAAGGAGGGATTATTCTTAGTCGGACTTGCAATGTGAGGTTCCAATTGTCTGAGTTCTTCAATACTTCATCAGCATATCTGTTGATTTACCCAACTTCCAGAACAATTCTTATTGGGTTGTGCACTGCTTGCCTTCGACGAATGAGTTATAGAAAAAGAGATGAAGAAAAAAGCAACAGGATGCTACTACAAGAGTTGGCTAGCCCTAAGAATGTAGCAATTACTAAAGAAGGCGACTTGATTAGTTCTGATGAACTGTTGTTCATGACTTTAGCACCCATTAAGGCCGCAACTGATGACTTTTCCGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTATCTGATGGTAATGAAGTAGCAGTCAAAAGATTATCAAGAAAGTCTTGGCAAGGCATAGAGGAATTCAAAAATGAGATCATACTGATTGCCAAACTTCAACACAGGAATTTGGTGAGGCTATTGGGTTGTGTCTTAGAGGGAGAGGAAAAGCTACTCATATATGAATTCATGTCTAACAAAAGCCTTGACCAATTTATCTTTGATCCAGATAAACGTTCAAAACTTGATTGGAACACCTACCATGGCATCATTAATGGCATAGCCAAAGGACTACTTTATCTTCACGAGGAGTCTCGATTAAAAATCATTCATAGAGACTTAAAACCAAATAATGTGTTGTTAGACCACGAAATGGTTGCCAAAATATCTGATTTTGGCATGGCCAGGATATTTTCTGAGAATCAGAACGCAGCAAACACTAAAAGAGTTGTGGGAACATATGGATATATGGCACCAGAGTATGCAATGGAGGGGTTGTTCTCTATGAAATCTGATGTCTTCAGCTTTGGCGTTATCTTACTTGAAATTATCAGCGGGAAAAGGAATAGCGGCTTTTACATGACCGAACTTGCCCCGACGCTGCTAGCATATGCATGGAGGCTATGGAATGAAGGAAAAGGATTGGATTTTGTGGATCCAGTGCTATTGGAATCATGTCATTCCTTTGAAGTTCTAAGGTGCATGCAAATTGGACTACTATGCGTGCAGGAAGATCCGAGACAAAGACCCACCATGTCAAATGTGGTGGTTCTCCTGGGAAGTGAATCAATGGCTCTTTCCCAACCAAGACAACCAGCATTTTCTATGGGTAAGGTGCTTCATGTCGATCCATCTACACCAACCAATCCTTTCGTGAATGAGATTATATTTTCTGATATTTTACCACGATGA 1929 0.3997 MVKDRPSPVLLCIILLLSINRVSCADPIDTYCSSEFPTYTPNSSFHNNLKLVLELLSSNNASKTGFYNTSVGEGSNKVYAQALCRGDITNSTVCKECVEKASQDIMNECKSEDAIIWYELCQVRYSFQMFFSSMVYTGKYPKQNDQEKNVSDPVRFDELLMYLMKNISYDAAFNPAKNMFASGEIDFPGKKTIYGLVQCTRDISETDCNSCLNSALTELLACCSYREGGIILSRTCNVRFQLSEFFNTSSAYLLIYPTSRTILIGLCTACLRRMSYRKRDEEKSNRMLLQELASPKNVAITKEGDLISSDELLFMTLAPIKAATDDFSDTNKLGQGGFGAVYKGVLSDGNEVAVKRLSRKSWQGIEEFKNEIILIAKLQHRNLVRLLGCVLEGEEKLLIYEFMSNKSLDQFIFDPDKRSKLDWNTYHGIINGIAKGLLYLHEESRLKIIHRDLKPNNVLLDHEMVAKISDFGMARIFSENQNAANTKRVVGTYGYMAPEYAMEGLFSMKSDVFSFGVILLEIISGKRNSGFYMTELAPTLLAYAWRLWNEGKGLDFVDPVLLESCHSFEVLRCMQIGLLCVQEDPRQRPTMSNVVVLLGSESMALSQPRQPAFSMGKVLHVDPSTPTNPFVNEIIFSDILPR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0347 642 Pfam Protein tyrosine and serine/threonine kinase 330 596 IPR001245 GO:0004672|GO:0006468
Apr7g0347 642 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Apr7g0347 642 Gene3D - 139 245 IPR038408 -
Apr7g0347 642 Gene3D - 26 130 IPR038408 -
Apr7g0347 642 Pfam Salt stress response/antifungal 148 241 IPR002902 -
Apr7g0347 642 Pfam Salt stress response/antifungal 32 127 IPR002902 -
Apr7g0347 642 ProSiteProfiles Protein kinase domain profile. 327 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0347 642 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Apr7g0347 642 Gene3D Phosphorylase Kinase; domain 1 291 402 - -
Apr7g0347 642 SUPERFAMILY Protein kinase-like (PK-like) 309 597 IPR011009 -
Apr7g0347 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Apr7g0347 642 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Apr7g0347 642 SMART serkin_6 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0347 642 CDD STKc_IRAK 333 595 - -
Apr7g0347 642 Gene3D Transferase(Phosphotransferase) domain 1 403 610 - -
Apr7g0347 642 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 640 - -
Apr7g0347 642 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0347 Apr-Chr7 9206827 9209928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0347 38 613 Receptor kinase-like Gene Family AT4G23230 42.787 2.04e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g0347 PK_Tyr_Ser-Thr 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0347 - - gmx:102669229 1005.74