Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0346 ATGGATTCGATGAAGCAAATGTTACTGTTGATCCTCCTTGGCTTCCTCAACTTGGATACTGGTAAAGCACAGAGACAAAACTCTTCCCTCTTCCCAGTCTATCTTCACCAAAACTGTTCAGGCGCCAACACCACCGCCAACAGTGCCTTCCAACTAAACGTAAGGACCCTCCTCACTTCCTTATCTTCCAACGCCACCGCGCAATTCCTCAACACAACCGTCGCCGGAATATCCCCCTCCGACAGTGTGTTCGGACTGTTCATGTGCAGAGGCGACGTGCCCCCTCCTCTGTGTGGACAGTGCGTTGTGAACGCAACGCAGCGTCTCCTCTCACAGTGCTCCCTCGCCGAACAGGCCGTTATATGGTACGACGAGTGCATGGTTCGTTACTCCAACCACTCTTTCTTCTCCACCGTCGACACCAGGCCCCGTGTTGGCCTCCTCAACACCGCCAACATCTCCAACCAGCAAGCCTTCATGCGCATCCTCTTCCGAACCATGAACACAACCGCTGACATGGCTGCCAACTTTTCTATTGGTGCCAAGAAATATGGCACCAAGCAAGCCAACATTTCTGGGTTTCAGTCTCTCTTCTGTTTGGCTCAGTGCACCCCTGATTTGTCGCCAAGAGATTGTAGAAGGTGTTTGAGTGGTGTGATTGGGGATCTTCCTTGGTGCTGTCAAGGAAAGCAGGGTGGAAGGGTTCTTTATCCAAGCTGTAATGTTAGGTACGAGCTCTACCCTTTCTATCGCGTCACTGCTTCCCCACCATCGCCACTTCTTCTTCCTCCTACAGTTCCTGCTAATTCGGGAGGGAATGGTGGGATCTCGGCAGGGACTGTTGTTGCAATTGTGGTTCCAATCACGGTTGCTGTTATTATATTTATCGTTGGCATTTGTTTCTTAAGTAGAAGAGCGAGGAGGAAGAAGCGTGATTCTGTAAAAGAAGGAAAGACTGCACACGACATTAGCACTGTGGAGTCCTTGCAATTCGATTTCGGTACAATTGAAGCAGCCACGGACAAATTCTCTGCGGATAACAAGTTGGGGGAAGGTGGATTCGGTGAGGTTTATAAGGGCACTCTTCCAAGTGGACAAGAAATAGCTGTCAAGAGACTCTCCAAAAGCTCTGGGCAAGGTGGAGAAGAATTTAAGAATGAAGTAATGGTGGTTGCCAAGCTTCAACACAGAAATTTAGTGAGGCTTCTGGGATTTTGCTTTCAAGGAGCAGAAAAGATACTTGTTTATGAATATGTGCCCAAAAAAAGTCTGGACTATATTCTCTTTGATCCTGAAAAACAAAGGCAGTTGGATTGGGCAACACGGTTCCAGATTGTTGGAGGGATTGCTCGAGGCATTCAATATCTCCATGAAGATTCTAGACTTAGAATTATACATCGTGATCTTAAAGCTAGCAACATATTATTGGATGGAGAAATGAATCCTAAAGTCTCAGATTTTGGCATGGCAAGAATATTTGGAGTTGATCAAACTCAAGGAAACACCAGCAGAATTGTAGGGACTTACGGTTACATGTCTCCAGAATATGCAATGCATGGAGAGTTCTCTGTTAAGTCAGATGTGTACAGTTTTGGAGTCCTCCTTATGGAAATTATAAGCGGCAAAAAGAATAGCTCTTTCTACCAAACAGAAGGTGCTGAGGATCTATTGAACTATGCTTGGATGCTTTGGAAGGATGGAGCACCCTTGGAGCTGATGGACCCCATATTAAGAAAATCATATACTCAGAATGAAGTTATCAGAAGCATTCATATTGGTTTGCTCTGTGTCCAAGAAGATCCAGCTGACAGACCTACAATGGCGGCAATAGTTCTTATGCTAGACAGTAACACTGTTACTCTACCAACTCCTAAGCGGCCTGCATTTTTCCTTAATACTGATTCAAACATGCCAAAGGAGATGCAAATTGATGAATCTATAACAATGTCAGTACCAAAGTCAGTGAATGAGATGTCGGTCAGTGAAATGGATCCTCGATAA 2001 0.4568 MDSMKQMLLLILLGFLNLDTGKAQRQNSSLFPVYLHQNCSGANTTANSAFQLNVRTLLTSLSSNATAQFLNTTVAGISPSDSVFGLFMCRGDVPPPLCGQCVVNATQRLLSQCSLAEQAVIWYDECMVRYSNHSFFSTVDTRPRVGLLNTANISNQQAFMRILFRTMNTTADMAANFSIGAKKYGTKQANISGFQSLFCLAQCTPDLSPRDCRRCLSGVIGDLPWCCQGKQGGRVLYPSCNVRYELYPFYRVTASPPSPLLLPPTVPANSGGNGGISAGTVVAIVVPITVAVIIFIVGICFLSRRARRKKRDSVKEGKTAHDISTVESLQFDFGTIEAATDKFSADNKLGEGGFGEVYKGTLPSGQEIAVKRLSKSSGQGGEEFKNEVMVVAKLQHRNLVRLLGFCFQGAEKILVYEYVPKKSLDYILFDPEKQRQLDWATRFQIVGGIARGIQYLHEDSRLRIIHRDLKASNILLDGEMNPKVSDFGMARIFGVDQTQGNTSRIVGTYGYMSPEYAMHGEFSVKSDVYSFGVLLMEIISGKKNSSFYQTEGAEDLLNYAWMLWKDGAPLELMDPILRKSYTQNEVIRSIHIGLLCVQEDPADRPTMAAIVLMLDSNTVTLPTPKRPAFFLNTDSNMPKEMQIDESITMSVPKSVNEMSVSEMDPR* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0346 666 ProSiteProfiles Gnk2-homologous domain profile. 141 249 IPR002902 -
Apr7g0346 666 CDD STKc_IRAK 349 615 - -
Apr7g0346 666 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0346 666 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Apr7g0346 666 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 9 664 - -
Apr7g0346 666 Gene3D Transferase(Phosphotransferase) domain 1 419 622 - -
Apr7g0346 666 Pfam Salt stress response/antifungal 154 247 IPR002902 -
Apr7g0346 666 Pfam Salt stress response/antifungal 39 132 IPR002902 -
Apr7g0346 666 SUPERFAMILY Protein kinase-like (PK-like) 328 649 IPR011009 -
Apr7g0346 666 Gene3D Phosphorylase Kinase; domain 1 303 418 - -
Apr7g0346 666 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Apr7g0346 666 ProSiteProfiles Protein kinase domain profile. 343 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0346 666 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 9 664 - -
Apr7g0346 666 Pfam Protein tyrosine and serine/threonine kinase 345 612 IPR001245 GO:0004672|GO:0006468
Apr7g0346 666 Gene3D - 144 249 IPR038408 -
Apr7g0346 666 Gene3D - 32 135 IPR038408 -
Apr7g0346 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0346 Apr-Chr7 9189924 9192986 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0346 32 666 Receptor kinase-like Gene Family AT4G05200 52.914 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g0346 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0346 - - gmx:100305391 1064.29