Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0345 ATGGTTATCTCAAAACAGAACCTGAGAATCCTCAACGCGCTTCTCTCTCTGTATGGGTTATTAAGCTTCCCAACGAAAGCAGAAGCAGCTCCTACATACATAGGCACTTACTGCAATGACAACACCACATACGCACCTCAAAGCAGATTAGGCGCCAATCTCAATGTCCTCCTCCATTCTCTCACCACCAACGCCTCCCAACAACAAGACGGTTACTACATGACCATCATGGGCTTCGGAACCACAGACGCCGTCAACGGCGTCTTTCTATGCCGCGGCGACGTCAACGCCACCACCTGCCAACACTGCGTTGCCGACGCTGCCGGAGAAATCACGCGCCGCTGCCCCAACCAAACGGAGGCCGTAATCTGGTACGAGGAGTGCTTGGTGCGCTACACCAACAAGTACTTCAAGTACTACAGCATCGTCCCCAGGTTGAACCCGCGGGACGGGAAGAACGTCTCTGGCGTTGACTTGGGAAGGTTCAACCAATCATTGTTCGGATTGTTGAATGAGTTGGCGACGGAAGCGGCGAATTCCCCGTCGGCGAAGAAGTTCGCAACAGGGGAAGTGGAACTCACGAGGTCGCAGACGGTGTATGGATTGGGGCAGTGCACCGCCGACATAACCAATTATCAGTGTGAGACGTGCTTACGAAATGCCATCGGAACTCTACCCGCTTGCTGCAGCTCGCGACAGGGCGCAAGTGCTCTGCTTGCGTCCTGTTTTGTCAGATACCAACTGTACCCATTTTACAGTATGACCGCCACCTCTTCATCTTCTTCAGGAAAAAGTAGAATTGAAACAAAAACGGTTCTCATCATTGTTTTCTTGAGCGTAGTTCCGATAATGCTCTTATTTTTGAGCTGTTATTGTGTACGAAGAAGATCGAAGATGAAACGCAGGACAATTCTAAAGGAAAACTTTGGGGATGAACTTAACACTTTAGAATCGTTACAATTCAATTTGGCTATAATTGAAGCTGCCACAAACAAGTTTTCACCAGAAAACAAGATAGGCAAAGGAGGATTTGGTGTTGTCTACAAGGGTATACTTTTTGATGGACGACAAATAGCAGTAAAGAAACTCTCAAGAAGTTCAGGACAAGGTTCAGTAGAATTTAAAAATGAGACTTTACTAATAGCCAAACTTCAACACAGAAATTTGGTGACCTTATTAGGATTCTGCTTGGAAGAACAGGAGAAGATGCTTGTATATGAGTATGTGCCTAACAAGAGTCTCGATTACTTTCTATTTGATCCCCAAAAGCAAAGAGTACTACAATGGTTTGAACGTTACAAAATTATTGGAGGAATCGCACGAGGAATTCTTTATTTACATGAGCATTCACGACTTAAAGTTATACATCGTGATCTCAAACCCAGTAATGTGTTGTTAGATGATAATATGAATCCAAAAATATCAGATTTTGGCATGGCAAGAATAGTTGCTATTGATGAAGAACAAGGAAATACTAATAGAATCGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAATCAGATATATTTAGTTTTGGAGTCATAATTCTCGAGATAATTAGTGCTAAGAAGAATGCTCGTCCAATTGAATCACAAGATTATGATGACCTCCTAAGCATTGCTTGGAGACAATGGAGGAATCAAACCCCCTTAGAAATACTGGACCCTGATCTAAAAGACTCCTTTTCTCATAGTGAAGTTATTAAGTGTATTCAAATTGGTTTATTGTGCGTCCAAGAAAATCCAGACGATAGGCCTAATATGGCAAAAATTGTGTCATATCTTAGTAGCCTTTTGGTTGAATTGCCACTTCCTCACGAGCCTGCATTTTCCATGGATATGGAAATGAAGCTAAACATGTCAACAATGGAATCGAGTTTGGATCAATCTACAAATAATTCGGCAGTATCATCAATCAATGACATGTCTAAAAGTCATTTTTTCCCTTGA 1977 0.4264 MVISKQNLRILNALLSLYGLLSFPTKAEAAPTYIGTYCNDNTTYAPQSRLGANLNVLLHSLTTNASQQQDGYYMTIMGFGTTDAVNGVFLCRGDVNATTCQHCVADAAGEITRRCPNQTEAVIWYEECLVRYTNKYFKYYSIVPRLNPRDGKNVSGVDLGRFNQSLFGLLNELATEAANSPSAKKFATGEVELTRSQTVYGLGQCTADITNYQCETCLRNAIGTLPACCSSRQGASALLASCFVRYQLYPFYSMTATSSSSSGKSRIETKTVLIIVFLSVVPIMLLFLSCYCVRRRSKMKRRTILKENFGDELNTLESLQFNLAIIEAATNKFSPENKIGKGGFGVVYKGILFDGRQIAVKKLSRSSGQGSVEFKNETLLIAKLQHRNLVTLLGFCLEEQEKMLVYEYVPNKSLDYFLFDPQKQRVLQWFERYKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARIVAIDEEQGNTNRIVGTYGYMSPEYAMHGQFSEKSDIFSFGVIILEIISAKKNARPIESQDYDDLLSIAWRQWRNQTPLEILDPDLKDSFSHSEVIKCIQIGLLCVQENPDDRPNMAKIVSYLSSLLVELPLPHEPAFSMDMEMKLNMSTMESSLDQSTNNSAVSSINDMSKSHFFP* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0345 658 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Apr7g0345 658 Gene3D Transferase(Phosphotransferase) domain 1 409 612 - -
Apr7g0345 658 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Apr7g0345 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 24 634 - -
Apr7g0345 658 Gene3D Phosphorylase Kinase; domain 1 293 408 - -
Apr7g0345 658 Pfam Protein kinase domain 335 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0345 658 Pfam Salt stress response/antifungal 38 134 IPR002902 -
Apr7g0345 658 Pfam Salt stress response/antifungal 160 248 IPR002902 -
Apr7g0345 658 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0345 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Apr7g0345 658 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Apr7g0345 658 SUPERFAMILY Protein kinase-like (PK-like) 319 637 IPR011009 -
Apr7g0345 658 CDD STKc_IRAK 339 607 - -
Apr7g0345 658 Gene3D - 30 137 IPR038408 -
Apr7g0345 658 Gene3D - 151 251 IPR038408 -
Apr7g0345 658 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 24 634 - -
Apr7g0345 658 SMART serkin_6 333 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0345 Apr-Chr7 9182633 9186103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0345 13 658 Receptor kinase-like Gene Family AT4G05200 45.914 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Apr7g0345 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0345 - - cam:101500396 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0345 7 9182633 9186103 Apr7g0345 7 9182633 9186103 ECH