Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0335 ATGGCAGGAAAACTAGGCATAGGTTTAGGTGTTGGATTCTTATTCATCTTGATGATTGGGCTACTCTTACTTTTCAAAAGAAAAAATAGTTCCTCACACAGTGAGTTCCAAACAAGAAAAACTCACTCTAATTCCTCTTTAAATCCAAATGTAGAAAGTGACAGTGTGTACTTTGGAATTCCCTTCTTCTCCTACAAAGAGCTTGAAGAAGCAACAAATCATTTTGACATTGATAAACAAATTGGAGATGGAGGCTTTGGCACTGTCTACTTCGGAAAACTCAAAGATGGGCGGGAAGTTGCTGTCAAGCACTTATATGATCATAACTACAAACGGGTAGAGCAATTTACAAATGAAGTGCAGATCCTCACGCGTTTACGCCATAGAAATCTGGTGTCACTCTATGGTTGCACTTCATATCAAAGTCGTGAACTATTGCTTGTGTATGAATATATTCCAAATGGCACAGTTGGCAGCCATCTCCATGGGGAATTAGCAAAGCCTGGATTTTTACCATGGACTGTACGAATCAAAATAGCTATACAAACTGCCAGTGCATTGACATATCTTCATGCTTCTAAGATCATTCATCGTGATGTCAAAACTAACAACATTCTCCTTGACAATAGTTATTGTGTTAAAGTAGCAGATTTTGGCCTTTCAAGACTATTCTCCAATGATATCACTCATGTCTCCACAGCACCACAAGGTACCCCAGGTTATGTTGACCCAGAATATTACCAATGCTACCAGCTAACTAGCAAAAGTGATGTATATAGCTTTGGGGTTGTGCTTATTGAGTTAATATCATCTTTGCCAGCTGTTGATATGAATAGGCAAAAGGATGAAATTAACTTGTCAAATCTAGCCATAAAGAAGATTAGAAAAAGTGCATTAAGTGAGCTAGTTGATCCTTCTCTTGGTTTTGATTCAGACAATGAGGTTAAAAGGATGATAGTTCAGGTGGCAAAATTGGCTTTTCAATGTTTGCAACCGGACAGGGAATTAAGACCTTCCATGGATGAAGTGCTACAAGTATTAAAGAGAATTGAAAGTTGGAATAATGATCCAGAGCTAGAGCATTATGTCCATGCTTCTGAGGCTTTACATAATACTGTACTAGCCTCCCCTGAATTGGGTGAAGTTGGATTGTTGAAGAATGTGAAACTACCATCTTCATCAATATCCATTACAGATAGTTGGGAAAGTAAAACTACTACGTGTAATATCCATGCTTAA 1239 0.3801 MAGKLGIGLGVGFLFILMIGLLLLFKRKNSSSHSEFQTRKTHSNSSLNPNVESDSVYFGIPFFSYKELEEATNHFDIDKQIGDGGFGTVYFGKLKDGREVAVKHLYDHNYKRVEQFTNEVQILTRLRHRNLVSLYGCTSYQSRELLLVYEYIPNGTVGSHLHGELAKPGFLPWTVRIKIAIQTASALTYLHASKIIHRDVKTNNILLDNSYCVKVADFGLSRLFSNDITHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSLPAVDMNRQKDEINLSNLAIKKIRKSALSELVDPSLGFDSDNEVKRMIVQVAKLAFQCLQPDRELRPSMDEVLQVLKRIESWNNDPELEHYVHASEALHNTVLASPELGEVGLLKNVKLPSSSISITDSWESKTTTCNIHA* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0335 412 SUPERFAMILY Protein kinase-like (PK-like) 56 364 IPR011009 -
Apr7g0335 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Apr7g0335 412 Gene3D Phosphorylase Kinase; domain 1 48 151 - -
Apr7g0335 412 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 411 IPR044652 -
Apr7g0335 412 Pfam Protein kinase domain 76 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0335 412 PANTHER WALL-ASSOCIATED KINASE-LIKE PROTEIN 3 411 - -
Apr7g0335 412 Gene3D Transferase(Phosphotransferase) domain 1 152 361 - -
Apr7g0335 412 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Apr7g0335 412 SMART serkin_6 75 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0335 412 ProSiteProfiles Protein kinase domain profile. 75 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0335 Apr-Chr7 8904293 8920038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0335 3 412 Receptor kinase-like Gene Family AT1G25390 57.245 5.10e-164 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr7g0335 Pkinase 9.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0335 - - aprc:113870116 791.571