Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0334 ATGCCCATCCATGTTGGGGAGGTCATCTGCAGTGCCATGCTGGACGTCCTGAAACGGAGCAGAGATTCCTTAGCCTTTCCTTCCCTCATCATTTTGTTGTGTCAGGATGCAGGTGTTGATTTTGGAGATTATCAGCAGCGAATCAGAGCAGTTCCCCCCATTTCCACTGCATTGGTGAAGGATATGCTTAAGCCCCAGAAATCTTCAGACCCAGGCCTCACTCTCCCAGCAAAATTCAGGCCTAAGCTAGCTCTCCCAGTCAAGGAACAGCTGCACCAGATAGCTAAGCGGCAGACTGCCCTCCATGCTCGCCAGAACACCATGCTCCTCCTACTGGAAACCATGACGCTGAACATTGACAAGAAGATGGGGATGACTTCGGAGCAGATCTACTACTCCCTCACCGTTCCTGCCCCTCATCTCCGAGCTGCTGCCCAGCATGACCTACCTCCATTCAATCCCAATGCCCCCAGAGATGCCCCCAACTCCACTGAATCAAAAGCCGTTGTCAACACCTTACCGGGTTTCTCTGGCGAGCTACCGTTCCTACTCGAAACGGGATACATAAGCGTGAATGATTCTGAACTATTCTACTATTTCATCGAGTCACATGGAAATCCTCAAGAGGACCCTCTATTTCTTTGGTTAACGGGAGGCCCTGGTTGTTCTTCTCTCTCCGGACTTCTTTATGAAACAGGTCCTATAGAGTTTGATATTAATTCCTATATCGGGGGATTACCAAAATTGGCATACTATCCATATGCATGGACAAAGACTGCTAGCATCATATTCCTCGATTCTCCAGTGGGTACTGGCTTCTCCTATTCCAAAACTACACAAGGTTGGGAAACTTCGGACTCAGCATCGGCCTGGCAATCCTATCACTTCCTTAGGAAGTGGTTGGAAGAAAATCCACCCTATCTCTTAAACCAACTGTTTATTGCGGGTGATTCTTATTCAGGTCTAGTTGTTCCTTTGATTACAAAGTTGGTTGTAGAAGGTAATGAAGCCGGATTGCAGCCTCGGTTGAATCTTAAAGGATATTTGGTAGGGAGCCCTCACACAGATGAGTTTATCAACAGTAATTCTATAATACCATTTGCTCACCGCATGGCACTAATTTCAGACAAACTCTATGAGGAGGAAGGGAGGCTAAAGAAGGTGAAAGAACACTCCGTCCATCTAACATTTCATGAAGGGGCTAGAAGTAGCAAGGCTAAGCCAGGTCCATTTGCAAAACTTCTAGAAAGTCGAGGCATATGTGCACAGTATACCATGTCTAGTACACCACAACGAAATGGTGTGGCTAAAAGACAGAATTGTACTATCATAGAAATGGTTAAGAGTATGTTGAGTTACAGTTCTGTACCTATGTCTTTGTGGATGTACGTATTAAAGACCGCTGCGTATCTGCTTAATAGAGTTCCTAGTAAGGCAATTCCAAAGACTCCTTATGAACTGTTGACAGGAAAGAAACCCAGTTTAAAACATCTTCATGTCTGGGGTTGTCCAGTAGAAAAACTCAAATCAAGGTGCAACGGGAACTATGTGTTCGTGGATCCATCTAATGTAGAATGTCTTGCAGCTATTGCTGAGTACGAGAAGTGCATCAAAGGTATATGGTCCAGTGACATTTTGGAACCCAACTGTGAATTGGCTTCTACCCAGCATTACCTGCAAGTACATAAAAAATCACTCCAGGAAAATCCTCGAGATTTTGTGCTTTCCCCACCAAGAATTCCACAATTATGGTGTCGGGCTTTTAACTATGCACTATCTTATTCTTGGGCAAATGATGGCAGCGTTCAAGAAGCCTTGCATGTTCGGAAGGGCAAGGTGAAGGAATGGGATCGGTGCAACAAGAGTCTCTCGTACACTTATGATGTCCAAAGTGTGGTCCACATTCACAAATGGCTTAGCAAAAGGAACTTAACCGTTCTCGTGGAATGTGGTGACCGCGACATGGTTGTTCCCTTTGTGGGTACTGAGATATGGTTAAGGGCTCTAAATTTGACTGTTGTTGTGAAATGGCGACCATGGTATGTTGATGACCAAGTTGCAGGATACACAAGAGAGTATTCAGAAAATGGATTTCGTTTAACATACGTAACACTGAAAGGTGCGGGTCACACAGCTCCGGAGTTTAACCGCAGGGAATGTTATGAAATGTTTCAAAGATGGCTCCATGCCTACCCTCTGTAA 2202 0.4514 MPIHVGEVICSAMLDVLKRSRDSLAFPSLIILLCQDAGVDFGDYQQRIRAVPPISTALVKDMLKPQKSSDPGLTLPAKFRPKLALPVKEQLHQIAKRQTALHARQNTMLLLLETMTLNIDKKMGMTSEQIYYSLTVPAPHLRAAAQHDLPPFNPNAPRDAPNSTESKAVVNTLPGFSGELPFLLETGYISVNDSELFYYFIESHGNPQEDPLFLWLTGGPGCSSLSGLLYETGPIEFDINSYIGGLPKLAYYPYAWTKTASIIFLDSPVGTGFSYSKTTQGWETSDSASAWQSYHFLRKWLEENPPYLLNQLFIAGDSYSGLVVPLITKLVVEGNEAGLQPRLNLKGYLVGSPHTDEFINSNSIIPFAHRMALISDKLYEEEGRLKKVKEHSVHLTFHEGARSSKAKPGPFAKLLESRGICAQYTMSSTPQRNGVAKRQNCTIIEMVKSMLSYSSVPMSLWMYVLKTAAYLLNRVPSKAIPKTPYELLTGKKPSLKHLHVWGCPVEKLKSRCNGNYVFVDPSNVECLAAIAEYEKCIKGIWSSDILEPNCELASTQHYLQVHKKSLQENPRDFVLSPPRIPQLWCRAFNYALSYSWANDGSVQEALHVRKGKVKEWDRCNKSLSYTYDVQSVVHIHKWLSKRNLTVLVECGDRDMVVPFVGTEIWLRALNLTVVVKWRPWYVDDQVAGYTREYSENGFRLTYVTLKGAGHTAPEFNRRECYEMFQRWLHAYPL* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0334 733 SUPERFAMILY Ribonuclease H-like 410 486 IPR012337 -
Apr7g0334 733 Pfam Serine carboxypeptidase 174 389 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 Pfam Serine carboxypeptidase 506 729 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 PRINTS Carboxypeptidase C serine protease (S10) family signature 252 264 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 PRINTS Carboxypeptidase C serine protease (S10) family signature 265 275 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 PRINTS Carboxypeptidase C serine protease (S10) family signature 300 325 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 PRINTS Carboxypeptidase C serine protease (S10) family signature 700 713 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 Gene3D alpha/beta hydrolase 162 402 IPR029058 -
Apr7g0334 733 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 506 732 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 160 383 IPR001563 GO:0004185|GO:0006508
Apr7g0334 733 SUPERFAMILY alpha/beta-Hydrolases 170 732 IPR029058 -
Apr7g0334 733 ProSiteProfiles Integrase catalytic domain profile. 301 492 IPR001584 GO:0015074
Apr7g0334 733 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 17 506 732 - -
Apr7g0334 733 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 17 160 383 - -
Apr7g0334 733 Gene3D - 403 504 IPR036397 GO:0003676
Apr7g0334 733 Gene3D alpha/beta hydrolase 505 732 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0334 Apr-Chr7 8865894 8887570 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0334 596 733 Calmodulin-binding Proteins AT2G22960 44.928 8.71e-37 134