Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0295 ATGGAGTTTGAACCTCTGAGTTTAAGTAACGAGGTTATTGAATTTGATATGATTGGATTGGGGGATGATACTGCCATTGACATTGAGCACCCTGTTGAAGATGATGATGACCTTGTGAACATTGATAATGTTCCTGCTGCTACTGTTATTACTGGTGTAGCTAGTGGTATGGGACCTCAAATCCCAGGAGGGGACACCAACCTTGAACCTTATCAAGGTATGGACTTTGAATCTGAAGAGGCTGCTAAGGCCTTCTATAATTCGTATGCTCGCCGTGTTGGCTTTAGTACAAGGGTGAGCATGTCTCGACGCTCTAGGCGCGATGGTGCCATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTGTGGAGAAGGAGAAGCATTCTATTGATGGGAGAGTGAAGCGGCCTCGTGCTGAAACCCGAGTTGGCTGCAAGGCGATGTTGGTTGTGAAAATTCAAGATTCTGGCAGATGGGTTGTTTCTTCCTTTGTCAAGGAACACAACCATGAATTGGTTCCCCCTGATAAGGTGCATTGCCTTCGTTCTCATCGCCATGTTTCGGGTCCAGCTAAGTCATTGATTGATACTTTGCAGGGTGCTGGAATTGGGCCCAGTGGAATAATGTCTGCACTTATCAAAGAGTATGGTGGAATTAGCAATATTGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGGAGCAGTAGGCAAAGGACCCTTGGAGGTGACACTCAAATCCTCCTGGATTACTTGAAGAGAAAACAAACAGAGAATCCTTCATTTTTCTATTCTGTACAGGGTGATGAAGATCATTGCATGAGTAATATCTTCTGGGTTGATCCCAAGGCCAGGACTAACTACACTTACTTTGGTGACACTGTCACCTTTGACACAACATATAGGTCAAACCGCTATAGATTGCCTTTTGCACCTTTCACTGGAATAAATCATCATGGACAGCCTGTATTATTTGGTTGTGCTCTTCTGATAAATGAATCTGAGGCTTCTTTTGTTTGGCTGTTCAAAACCTGGCTTGAAGCAATGTCAGGCCGACCTCCAGTTTCAATCACTACTGATCATGATAGGGTGATTCGTGCAGCCATCAACTGTGTCTTTCCTAATACTCGCCACCGATTTTGCAAGTGGCACATTTTTAAAGAATGCCAAGAGAAGTTGTCTCATGTGCTTTCTGAACACCCTAATTTTGAAGCTGACCTCCACAAATGTGTTAACCTGACAGAGTCCACTGAGGAGTTTGAGTCTTGTTGGTCCTCTCTAATTGATAGGTATGATCTCAGGGAAAATGAATGGCTCCAAGCAATTTATGGTGATAGGCGGCAGTGGGTTCCAGTGTACTTGAGGGACACTTTCTTTGCAGAAATGTCAATAACACAAAGAAGTGATAGCATAAACTCTTACTTTGACGGATATATCAATGCATCAACAACACTTCAGCTTTTTGTTAAGCAGTACGAGAGGGCTCTGGAGAGCCGTTATGAGAAAGAAGTCAAAGCTGACTATGACACAATTAACACTGCTCCGGTTCTGAAGACTCCATCACCTATGGAGAAACAGGCAGCTGGAGTTTACACAAGGAGATTGTTTATCAAGTTTCAAGAAGAGTTGGTTGAGACATTAACTTTCTTGGCAAACAAAGTAGATGAAGAAGAAATGATTACCACATATAGAGTAGCCAAGTATGGGGAAACTCATAGGGCCTACTTTGTCAGATTTAATTATTTTGAGATGAAAGCTACTTGTAGTTGCCAGATGTTTGAGTTTTCTGGTCTAGTTTGTAGACACATATTAACTGTTTTTAGGGTGACAAATCTTCTTACCTTACCATCTCATTTTATTTTAAAAAGATGGACCAGGAATGCTAAAAGTGGTGTCATATTGGATCAACGTACTGCTGATTTGTCCAATGGTGCTCGAGAATCTATAACTATCAGATACAATAATCTTCGTTATGAGGCCCTTAAGTATGTTGATGAGGGAGTGAGCTCTCGAAAAATTTACGATGTGGCAATGAGTGCCCTTCGGGAGGCTGCAAATAAAGTGGCACTTGCAACAAAAAATGGTGGAAGAGATGTTATTTTAAATGGAACTTGTAAAGATGTTCTTCAGAGCAATGAAACAACTATAAGTTGTAGTGATCCTCAATTTGGCGCACAACAATCTTCATCTAAGGATGACCAAGACAGAACAATTGAGAAGTTGACACGTCAACTTGACCGAGCTAAAAGGAAGTGTGAAGTTTATAGGTCCAACCTGTTGTCCATTTTAAAAGATATTGAAGAGCAGAAGCTAGAATTATCAGTTAAAGTCCAAAATATCAAGTTAGAGATGAGAGATTGA 2367 0.4144 MEFEPLSLSNEVIEFDMIGLGDDTAIDIEHPVEDDDDLVNIDNVPAATVITGVASGMGPQIPGGDTNLEPYQGMDFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGAIIQRSFVCAKEGFRVEKEKHSIDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQGAGIGPSGIMSALIKEYGGISNIGFTERDCRNYMRSSRQRTLGGDTQILLDYLKRKQTENPSFFYSVQGDEDHCMSNIFWVDPKARTNYTYFGDTVTFDTTYRSNRYRLPFAPFTGINHHGQPVLFGCALLINESEASFVWLFKTWLEAMSGRPPVSITTDHDRVIRAAINCVFPNTRHRFCKWHIFKECQEKLSHVLSEHPNFEADLHKCVNLTESTEEFESCWSSLIDRYDLRENEWLQAIYGDRRQWVPVYLRDTFFAEMSITQRSDSINSYFDGYINASTTLQLFVKQYERALESRYEKEVKADYDTINTAPVLKTPSPMEKQAAGVYTRRLFIKFQEELVETLTFLANKVDEEEMITTYRVAKYGETHRAYFVRFNYFEMKATCSCQMFEFSGLVCRHILTVFRVTNLLTLPSHFILKRWTRNAKSGVILDQRTADLSNGARESITIRYNNLRYEALKYVDEGVSSRKIYDVAMSALREAANKVALATKNGGRDVILNGTCKDVLQSNETTISCSDPQFGAQQSSSKDDQDRTIEKLTRQLDRAKRKCEVYRSNLLSILKDIEEQKLELSVKVQNIKLEMRD* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0295 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 45 762 - -
Apr7g0295 788 Coils Coil 765 785 - -
Apr7g0295 788 Pfam MULE transposase domain 297 389 IPR018289 -
Apr7g0295 788 Coils Coil 733 760 - -
Apr7g0295 788 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 45 762 IPR031052 GO:0006355
Apr7g0295 788 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Apr7g0295 788 Pfam SWIM zinc finger 565 611 IPR007527 GO:0008270
Apr7g0295 788 SMART 26again6 588 615 IPR006564 GO:0008270
Apr7g0295 788 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0295 Apr-Chr7 8307865 8313176 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr7g0295 MULE 1.4e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0295 - - gmx:100782414 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0295 7 8307865 8313176 Apr7g0295 7 8307865 8313176 ECH