Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0285 ATGACACGCACGCTCAGAATTCTCAAATCCGCTGACAACGCCACCGCCGTCGCGGCGGCGCCGCCGCCGGAGGCTGTGGCCCTTGAGTCAGATTTCGTGGTGATTCTCGCGGCCCTGCTCTGCGCCCTCATATGCGTGGTGGGACTCGTCGCCGTCGCGAGGTGCGCTTGGCTCCGGCGGGGCTCCGGCAACGGAAGCTCTCCTCGGCAAGCTTTGGCGAACAAGGGGCTGAAGAAGAAGGTGCTGCAGTCGCTTCCCAAGTTCGCTTACGTCGATAGCAACCCGAGCAAGTGGGTCGCGACGTCGGAATGCGCGATTTGCCTGGCGGATTTCGCCGCCGGCGACGAGATTCGGGTGCTGCCGCAGTGCGGCCACGGGTTCCACGTCGCGTGCATAGACACGTGGCTCGGGTCCCACTCGTCGTGCCCTTCATGTCGGCAGGTTCTGGCGGTGGCTCGGTGCCAGAAGTGTGGGCGGTTTCCGGCCACCGGCGGCGGAGTCACCAGAACGGCGGTGAGTGAACCCGAATTGAAGTCCAGAGAAGACGACAATGCAGCTAATAATAACAATAATAATAGCGGCGGTGTTAGTGGGAGCAGTAACATGGAACATCATCATAGCCACCAAGTTAACATTGGTGGTTTCTTGCCATGA 654 0.6086 MTRTLRILKSADNATAVAAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGSGNGSSPRQALANKGLKKKVLQSLPKFAYVDSNPSKWVATSECAICLADFAAGDEIRVLPQCGHGFHVACIDTWLGSHSSCPSCRQVLAVARCQKCGRFPATGGGVTRTAVSEPELKSREDDNAANNNNNNSGGVSGSSNMEHHHSHQVNIGGFLP* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0285 217 MobiDBLite consensus disorder prediction 165 217 - -
Apr7g0285 217 MobiDBLite consensus disorder prediction 184 207 - -
Apr7g0285 217 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Apr7g0285 217 SMART ring_2 104 145 IPR001841 -
Apr7g0285 217 SUPERFAMILY RING/U-box 83 151 - -
Apr7g0285 217 Pfam Ring finger domain 103 146 IPR001841 -
Apr7g0285 217 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 191 - -
Apr7g0285 217 CDD RING-H2_PA-TM-RING 103 146 - -
Apr7g0285 217 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 65 151 IPR013083 -
Apr7g0285 217 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0285 Apr-Chr7 8176766 8177814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0285 1 188 C3H Transcription Factor Family AT1G76410 53.333 1.69e-63 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0285 - - gmx:100789620 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0285 7 8176766 8177814 Apr3g0432 3 8604370 8605186 PCT