Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0278 ATGGCAGCAGGAACTGGTTACATGTCTGAAACAGCTATAATGGGTGGTGGGTGTCCCTGCCCCAAGGGTAATAGTGACCGTTCCATGGAGGATCAGAATGGTGATACTCTGGGTAATTTGAATCCTAATGCTGGCAAACCTCCAAGGGACCTTTCGGTTATGCGCCATTCCAGTAGTTCTTCATGGTTGGCTGAACCGGACTCAAATGTTAATCTTATTGGCCTTAAATCAAGCACAGAAGAAAAATCAGAGTTTTCACCTGTATTGCGATCTGGAAGCTGTTCTGATAAAGGTCCAAAGCAGTATATGGAGGATGAGTTCATATGTGTTGATGTTCTTGGTCAATGTGTTGGTCCAGAAGCAGACGTTCATTCTCCTGCAGCATTTTATGGGGTATTTGATGGACATGGTGGTATTGATGCGGCATCATTTACCAGAATGAACATCCTCAAGTTCATAGTGGAGGATCCCCATTTCTCATCTGGCACTAAAAAAGCAGTTAAGAGTGCATTTGTGAAGGCTGATCTTGCATTTAGAGATGCTAGTGCTCTTGATAGTTCTTCAGGCACCACTGCTTTGGTAGCCCTTGTGTTGGGAAGGGCCATGCTAATTGCCAATGCAGGAGATTCTCGTGCTGTATTGGGCAAACGGGGCAGAGCGATTGAACTTTCTAAAGACCATAAACCAAACTGCACTTCTGAAAGATTAAGAATTGAGAAACTGGGTGGTGTCATCTATGATGGATACCTCAATGGCCAACTATCAGTGGCTCGTGCTCTTGGAGATTGGCACATCAAAGGTTCTAAAGGTTCTAAGAGCCCCTTAAGCTCTGAGCCCGAACTAGAGGAGATTGTCCTAACAGAAGAAGATGAGTTTTTGATAATGGGTTGTGATGGATTATGGGATGTGATGAGTAGCCAGTGTGCTGTCACAATGGTGAGGAAGGAACTCATGCAGCATAACGATCCCACCAAATGTGCTAAGGTACTTGTAACCGAGGCCCTCCAACGCAACACGTGTGACAATCTCACAGTGGTTGTGGTGTGTTTCTCCAATGATCCACCTCCTAAAATTGAAATTCCTAGATCACATAGAAGGAGGAGTATTTCTGCTGAAGGCCTTGACCTTCTCAAGGGTGTCTTGAGTAATAGATGA 1155 0.4476 MAAGTGYMSETAIMGGGCPCPKGNSDRSMEDQNGDTLGNLNPNAGKPPRDLSVMRHSSSSSWLAEPDSNVNLIGLKSSTEEKSEFSPVLRSGSCSDKGPKQYMEDEFICVDVLGQCVGPEADVHSPAAFYGVFDGHGGIDAASFTRMNILKFIVEDPHFSSGTKKAVKSAFVKADLAFRDASALDSSSGTTALVALVLGRAMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIVLTEEDEFLIMGCDGLWDVMSSQCAVTMVRKELMQHNDPTKCAKVLVTEALQRNTCDNLTVVVVCFSNDPPPKIEIPRSHRRRSISAEGLDLLKGVLSNR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0278 384 SMART PP2C_SIG_2 110 350 IPR001932 -
Apr7g0278 384 Pfam Protein phosphatase 2C 92 342 IPR001932 -
Apr7g0278 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Apr7g0278 384 PANTHER PROTEIN PHOSPHATASE 2C 27 372 IPR015655 GO:0004722|GO:0006470
Apr7g0278 384 Gene3D - 74 354 IPR036457 -
Apr7g0278 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Apr7g0278 384 PANTHER PROTEIN PHOSPHATASE 2C 47-RELATED 27 372 - -
Apr7g0278 384 SUPERFAMILY PP2C-like 83 352 IPR036457 -
Apr7g0278 384 CDD PP2Cc 90 350 IPR001932 -
Apr7g0278 384 MobiDBLite consensus disorder prediction 26 40 - -
Apr7g0278 384 MobiDBLite consensus disorder prediction 18 54 - -
Apr7g0278 384 SMART PP2C_4 80 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0278 Apr-Chr7 8114602 8117955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0278 73 382 PP2C-type Phosphatase Gene Family AT3G51470 77.742 1.45e-177 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0278 K14803 - gmx:100786416 624.009