Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0271 ATGGGAGGCTTATTACACTTTTTTGATTTCAATCAAGGGAGGATGGCCAAGAAAGTCCATGCTCATAAGAGACATCATGCTGGCCTTGAAGCTCCTCGCAATAGTCTAGATCTGCAAGTAGAAACACCTCAGAACTACTGTCCAGAAGGAGAATTACCATACAATTATCAAGTAGAAGAAGAAGACAGGTCTGAGAATAAACCCTGTTCAAACGTGGGATCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACGATCAAGCACCAGACAAAATGCACCAAGCCTTGTGGCAAGGTTGATGGGGATAGATATGATGCCATTAGACACTAAATCTGTTATTCCATCAGATAAAAGAGTGAGTGAAAATAAAGGGAGCAAGTTTTCAGACAAAGGAATGAATCGAAGGGGTTCAGCTAGTTGGGGTTCTTCTAACTTTAATTATTCTAGCCAGATGGAATTTGATTCATTTTATGAAGTCATAGATGATGATGATGATGATGGATGGAACCGGAGTTTTGGAGAACCAAGGCCGCGGGAACATCCTCAGGAAGAGGAACTCCAGAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGCTGAACTTGTTCAAGAGAACCTGAACAAGGAAAAGGTGGCACATAATGATGCAAGTTATCTGAGAGCAGCAACAGGTAAATTTGCAGAACTTGACTGCCACTCTTTCAAAACTGAGCTACATGACAGTTATGGTTCAGAATATCATGGTAATATGGTGAAGTTAATCCCCGCTATGCAAAGGAAAACCTTTCCTTCTAGGAGCAGAACACTAAGCAGAGACTTTGAGGAGTCCTTAATGATGAAATCTTCTAATAGATTAGGTACATCTTCTCCCACTCGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTTGCAACCTTGAAGAGAATTGGACAAGTTCAGCAAGTACTATACAAGGGAGAAATAGTATAGAAGATTTTCTTGAGGAGGTGAAAGACCGTTTGAAATGTGAACTGCAAGGGAAAAATGTCAAAAAAGGTTCTGTGGTTCGAGGAAGTGGAATTGAGACACCTTACAATGAAAAACCACCTGATCCTAAACTAATAGCCCGTCATATAGTAAAGCAAGTCAAAGAAAGTGTAACAAGAGATGCTGACACAAATTTACTCCAGTCAGGATCAATAGGATCATACAAAAGTGAAATGCAGTTCAATGGACCAAGCTCTCCAGAATTTATCAGTAGAGATACCAGGAGGTTCTTGTCAGAGAGGCTAAGAAATGTTGTAAAAAGTGAAACTCATGTTCCTGAGGGGAAATCAAGGTCACTTTCATTAGACAATCAAAAAGTTATGCTAAAGCAAACGGGGGATGTTATGAAGTATGCAAAAAACTGGGAAATTTCCAAAGATGAAACAGAAATACAAACAGGATCTTTTAGGCATGAACCAGATGACAATATATTGCTACAAAAGGAGTTGTCCCCTAGGAACCTAGTAAGATCCTTGTCTGCTCCTGTATCACGGTCAGGAACATCATTTGGGAAGCTTCTTCTAGAGGACCGCCACATTTTAACTGGTGCTCATATTCGGAGGAAGCTTGAAGCTGTTGAATCTATGCCTATTGATGTCAAGACACGGAAAAAGGATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAGTCTTGCTCTTAAAGGGAGGCTTTTTGGCAAAAGGGTTCAATCGATGGTGGAATCACATGGCAATGAATATGGTCCCATGGCAAGAGATGTCACAAGTGGACCAACAGTTCTCATGAACTGCGGTGAGAGGCATGAAAACTCAACTGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCAGTGTTCATGAAGAATTTTGGAGGCGAGCTGAATATTCAAGTCCAATGTCAACTCCTGATGTGTCTTCAAGAGATGATAATGTTGTTCCCCAGATTTTCAGAGATATCAGCTCTGGCTTGAATGAGCTAAGGAGACAACTGAATCAACTTGAGTCTGATGGTCCTGAGGACTTCACTATGAAACAGGAGTCTGTTGAGTCTGAATTAGTGCAATTAGAGGATCCAGCAGAATCTTACATAAGAGATCTCCTGGTAGCTTCTGGTTTGTACTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCAATTGGCAAATCTGTTTTTGAAGAAGTGGAAGAATCTCATAAGAAATTGGTCAAGGAAAACGATGAAAGTTCTACAAAGGGTCAGAATGAGGGTAGGCTAGACCACAGGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCAGTAGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGCAATTTAGCAACTCTTCCATGTTGCCACCACCTTGTGGAAAGGAACTGTTGAACTTAGTATGGGACATTATCAGCTTTTCTTTATATCCTCCATCTGATATATCTACTTATTCACTTGATACTTTGGTGGCTCAATTCCTAGGATCCATCCCTTGGTTTGGATTAATAAATGATGAGATCAGTACATTGGAAAGAGATATAGCATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGCTCTAA 2652 0.4008 MGGLLHFFDFNQGRMAKKVHAHKRHHAGLEAPRNSLDLQVETPQNYCPEGELPYNYQVEEEDRSENKPCSNVGSMKKLINEELSKRSSTRQNAPSLVARLMGIDMMPLDTKSVIPSDKRVSENKGSKFSDKGMNRRGSASWGSSNFNYSSQMEFDSFYEVIDDDDDDGWNRSFGEPRPREHPQEEELQKFKKEFEAYQAARFLECSKVAELVQENLNKEKVAHNDASYLRAATGKFAELDCHSFKTELHDSYGSEYHGNMVKLIPAMQRKTFPSRSRTLSRDFEESLMMKSSNRLGTSSPTRIVILKPGPDSICNLEENWTSSASTIQGRNSIEDFLEEVKDRLKCELQGKNVKKGSVVRGSGIETPYNEKPPDPKLIARHIVKQVKESVTRDADTNLLQSGSIGSYKSEMQFNGPSSPEFISRDTRRFLSERLRNVVKSETHVPEGKSRSLSLDNQKVMLKQTGDVMKYAKNWEISKDETEIQTGSFRHEPDDNILLQKELSPRNLVRSLSAPVSRSGTSFGKLLLEDRHILTGAHIRRKLEAVESMPIDVKTRKKDRFNIKERVSNFRYSLALKGRLFGKRVQSMVESHGNEYGPMARDVTSGPTVLMNCGERHENSTEVPPSPASVCSSVHEEFWRRAEYSSPMSTPDVSSRDDNVVPQIFRDISSGLNELRRQLNQLESDGPEDFTMKQESVESELVQLEDPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGKSVFEEVEESHKKLVKENDESSTKGQNEGRLDHRVLLDLLNEALSVVLGPPLTLSRFRRQFSNSSMLPPPCGKELLNLVWDIISFSLYPPSDISTYSLDTLVAQFLGSIPWFGLINDEISTLERDIACLITDDLVEELTKDML* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0271 883 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 882 - -
Apr7g0271 883 Pfam Domain of unknown function (DUF4378) 709 877 IPR025486 -
Apr7g0271 883 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 882 - -
Apr7g0271 883 Pfam DUF761-associated sequence motif 91 107 IPR032795 -
Apr7g0271 883 Coils Coil 664 684 - -
Apr7g0271 883 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0271 Apr-Chr7 8062937 8068714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0271 75 882 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 39.856 3.43e-153 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0271 - - gmx:100779720 1409.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0271 7 8062937 8068714 Apr7g0271 7 8062937 8068714 ECH
Apr7g0271 7 8062937 8068714 Apr3g0418 3 8167493 8171314 PCT