Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0265 ATGGATTCCTCTTTGCTCACCAACCTTCTAATCTTCAGCAACACAATCCAACCAGAGTTGATCAGGAGCGTGCATGTCTATCGCCAATGGGATGGTGAGGAAATAGAAGTTGAAAGAGAGTTTGTGTTTTCAGAGACTAGTTCCTATGAGGAAATGCAGGCTACCCCAATTCTTAGATTGATGAAATCTCATGTTTCTGAGGTGTATGAAGGGTACAAGAATGGAGTGTGGCTTTGTATCTTTGCCTTTCATGCCAATCACACACCTCAATTTTCCCACATTCCATCCTTGTTGATGGTCACAAGAAATCCAAAGCTTCAGATGATTCCTAACTTGCTTAATGATCTCCATATGATACACAAATTAGACTGGAGGGTGGAAGACAAAGATATACCACAAGACTCTATGGGGGAAGAATGGCAAGGAAACAGCAATGGTAGCCAACCTACACAAAAAATCTTGCCTGTGTTTGATCAGGATCTCAACTGTCTTCCTTATGAAGAAGATGAGTCTGAGTTACCAGACAATGAGATAGATGTTGAAAGCTCACCAGGTTTGATAGAGAAGAAAAAGAGGGCCCCCAGCGACCATGTAGCAAAAATTTCTTTATCAGATTTGGTCAAGTACTTTGGTATGCCAATTGTAGAAGCATCAAGAAATCTAAATGTTGGGCTTACTGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATCAAATCACTTGATAGTCTCATTCATGATCTTCAGGAAGAGGCAAAGCACCAAGAATTGAAGGACAAGGAAGCAGCCATGGCTGTGACAAAGAGGCAAAGGATGTTGGAGAGTGAGAAGGAAAACATAGAGAAGAAACCCTTCATGGACATCCAAAGTGAGACCAAGAGATTCAGGCAAGATGTTTTCAAGAGAAGACACAGAGCTAGAGCTACTGAAAAACAGAATTCTGCAGTAGCCAACACATAG 981 0.4179 MDSSLLTNLLIFSNTIQPELIRSVHVYRQWDGEEIEVEREFVFSETSSYEEMQATPILRLMKSHVSEVYEGYKNGVWLCIFAFHANHTPQFSHIPSLLMVTRNPKLQMIPNLLNDLHMIHKLDWRVEDKDIPQDSMGEEWQGNSNGSQPTQKILPVFDQDLNCLPYEEDESELPDNEIDVESSPGLIEKKKRAPSDHVAKISLSDLVKYFGMPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEAKHQELKDKEAAMAVTKRQRMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARATEKQNSAVANT* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0265 326 Coils Coil 270 290 - -
Apr7g0265 326 PANTHER PROTEIN RKD4 11 319 IPR044607 GO:0003700
Apr7g0265 326 ProSiteProfiles RWP-RK domain profile. 183 268 IPR003035 -
Apr7g0265 326 Coils Coil 245 265 - -
Apr7g0265 326 Pfam RWP-RK domain 201 248 IPR003035 -
Apr7g0265 326 PANTHER PROTEIN RKD5 11 319 - -
Apr7g0265 326 MobiDBLite consensus disorder prediction 303 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0265 Apr-Chr7 8022641 8027581 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0265 16 326 AtRKD Transcription Factor Family AT4G35590 49.235 7.58e-96 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Apr7g0265 RWP-RK 2.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0265 - - gmx:113001653 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0265 7 8022641 8027581 Apr7g0265 7 8022641 8027581 ECH