Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0264 ATGAAGGAGTTCAGTTTTGTGGAGCTGAAAGCTGCCACCAGAAGTTTCAAGTCGGATTTATTGCTTGGTGAGGGTGGTTTTGGCAAAGTTTACAAAGGTTGGTTGGATCACAACACACTCGCACCTGCAAAACCTGGCTCTGGATTCGTCGTTGCTGTCAAAAAATTGAAGCCTGAAAGTGTTCAGGGATTGCAAGAGTGGCAGTCGGAAATAAACTTTTTAGGAAGGGTTTCTCACCCAAACCTAGTGAAGTTATTGGGTTACTGTTGCGATGAGGGATTTCTCCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTGGAGAACCATCTTTTTGGGAGAAATGCTAGCAGGGAACCACTCTCTTGGGACACCCGAATCAAAATAGCTATTGGTGCTGCTCGGGGCTTGGCTTTCTTGCACACCTCAGAAAAGCAAGTCATATACAGAGATTTCAAAGCCTCCAATATACTACTTGATGGGGATTACAATGCCAAAATTTCTGATTTTGGCTTGGCTAAATCAGGGCCTTCCGGGGAAGATTCACACGTAACTACAAGGATCATGGGCACATTTGGCTATGCTGCTCCAGAATACATGGCAACAGGCCACTTGTATGTGAAGAGTGATGTTTATGGTTTTGGTGTAGTTCTGCTTGAAATGCTGACAGGGTTGAGAGCACTTGACACGAAGCGCCCCAATGGGCAGCAGAACCTGGTTGAATGGATTAAGCCTTCTCTCTCTGATAAAAGAAATTTGAAAACCATTATGGATAGTAAAATAAAGGGTCAGTATTCATCCAAGGAAGCATTGAAAGTAGCACAACTCACTCTAAAATGCCTTCAAAATGACCCTAAAAATCGGCCCTCTATGGAAGATGTTTTGGACACTTTGGAAGGCATTCAAGGTATTATCAAGCATAGAATGAAAGCATCCAAGAAACAACGTACTAAGTTAGCAGCTATGAACAATTTCCAACAGCCAAGGAATGAAATGTAA 996 0.4317 MKEFSFVELKAATRSFKSDLLLGEGGFGKVYKGWLDHNTLAPAKPGSGFVVAVKKLKPESVQGLQEWQSEINFLGRVSHPNLVKLLGYCCDEGFLLVYEFMPRGSLENHLFGRNASREPLSWDTRIKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGDYNAKISDFGLAKSGPSGEDSHVTTRIMGTFGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPNGQQNLVEWIKPSLSDKRNLKTIMDSKIKGQYSSKEALKVAQLTLKCLQNDPKNRPSMEDVLDTLEGIQGIIKHRMKASKKQRTKLAAMNNFQQPRNEM* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0264 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Apr7g0264 331 ProSiteProfiles Protein kinase domain profile. 16 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0264 331 PANTHER OS01G0588500 PROTEIN-RELATED 1 309 - -
Apr7g0264 331 Gene3D Phosphorylase Kinase; domain 1 1 100 - -
Apr7g0264 331 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 1 309 - -
Apr7g0264 331 Pfam Protein tyrosine and serine/threonine kinase 21 297 IPR001245 GO:0004672|GO:0006468
Apr7g0264 331 ProSitePatterns Protein kinases ATP-binding region signature. 22 55 IPR017441 GO:0005524
Apr7g0264 331 SUPERFAMILY Protein kinase-like (PK-like) 2 307 IPR011009 -
Apr7g0264 331 CDD STKc_IRAK 22 300 - -
Apr7g0264 331 Gene3D Transferase(Phosphotransferase) domain 1 101 326 - -
Apr7g0264 331 PIRSF TyrPK_CSF1-R 19 117 - -
Apr7g0264 331 PIRSF TyrPK_CSF1-R 106 224 - -
Apr7g0264 331 PIRSF TyrPK_CSF1-R 260 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0264 Apr-Chr7 8012736 8015555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0264 4 315 Receptor kinase-like Gene Family AT4G02010 48.276 1.20e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr7g0264 PK_Tyr_Ser-Thr 9.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0264 - - gmx:100778116 503.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0264 7 8012736 8015555 Apr7g0264 7 8012736 8015555 ECH
Apr7g0264 7 8012736 8015555 Apr3g0414 3 8046663 8050465 PCT