LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr7g0231	ATGGGGACAGAAAAATCTAATACGTTTGGTACACCTTACAATATGGTGCCTGAAGATGGAACTCTTGGCGCACCGCAATGGACTACTTCTATGCAGGCATATAACGGGTCAGAGTCTACTCCAATTCCCATTTTAAGTCAACATGGAGCTGGTTCTTACATGTCTCTCTACATGTGGCCATATCAGGCAAGCAGCACGCTACTTCAATCTGATGCTTTGCATGATCCCAGCAAGCTGTCCAGTAAACCCACAGTAGCTGGGGATGCTGCACTGGCTTTTTCAGAAATGGTATACAATACTTTTGGTGAACAAAATATGAATTCAATGAATGGATGTGCTAGAAACTTACAACCTGAAAGTTTAATTACTGACAAATCAAGAGAAAATGAAAATGAATCTTCAACACCACAAGACAGCAGAGATGTAGTGTCACGGAGTGCAACAAATGGAAGCAAGGGATCACAGGACAAAGACCGTGACACAAACAATGATTTTCCTTCAGCTAAGAAGCTGCAATCAAACTCAACGGAACTGAATCATAATTTTGGGACAGGCCTAAATGCATCTGGCACTAATGCTCAACTTGCAAAATTGGAAAAGGATGAAATACGCAAAGAAAGGAAAAGACAGTCAAACAGGGAATCAGCTAAGAGATCAAGGATAAGGAAAGAGAAGGAATGTGACGAGCTACATAATAACATTAGAATTCTCAAGGATGAAAACTCTTTGCTAACACAAAGGCTGGTGAGTCTTTCTGAAGACTGTATGGAGCTTTGCAACGAGAATGATTTCATAGAGGAACAACTGGTTGAGATATATGGACCAGAATCAATAGCCGATTTATTGCCTTTAAAGCCTGCCTCTGTTACTGGTTAA	876	0.4075	MGTEKSNTFGTPYNMVPEDGTLGAPQWTTSMQAYNGSESTPIPILSQHGAGSYMSLYMWPYQASSTLLQSDALHDPSKLSSKPTVAGDAALAFSEMVYNTFGEQNMNSMNGCARNLQPESLITDKSRENENESSTPQDSRDVVSRSATNGSKGSQDKDRDTNNDFPSAKKLQSNSTELNHNFGTGLNASGTNAQLAKLEKDEIRKERKRQSNRESAKRSRIRKEKECDELHNNIRILKDENSLLTQRLVSLSEDCMELCNENDFIEEQLVEIYGPESIADLLPLKPASVTG*	292

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr7g0231	291	Gene3D	-	203	269	-	-
	Apr7g0231	291	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	287	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Apr7g0231	291	CDD	bZIP_plant_GBF1	205	256	IPR045314	GO:0003700\|GO:0006355
	Apr7g0231	291	Pfam	bZIP transcription factor	201	262	IPR004827	GO:0003700\|GO:0006355
	Apr7g0231	291	MobiDBLite	consensus disorder prediction	166	194	-	-
	Apr7g0231	291	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	207	222	IPR004827	GO:0003700\|GO:0006355
	Apr7g0231	291	MobiDBLite	consensus disorder prediction	197	224	-	-
	Apr7g0231	291	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	202	258	IPR004827	GO:0003700\|GO:0006355
	Apr7g0231	291	MobiDBLite	consensus disorder prediction	136	151	-	-
	Apr7g0231	291	Coils	Coil	193	268	-	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr7g0231	25	281	bZIP Transcription Factor Family	AT4G36730	26.241	5.05e-20	86.3

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Apr7g0231		bZIP_1	1.2e-12	CL0018

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr7g0231	K09060		-	gmx:102665715	358.992

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