Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0222 ATGGAAAAAGTGGCTCCTCCTCCGATTCTGATGCACAAGAAGCGCGATCTATCATACGGCGTCGTTCGGGAACCCCAGAGCGAGAGTTGGAGTGCCAAAGAGTGGAACTGGGACAGCGTGAGGTTCGTTGGGAAACCCTTACCCTCCTCCAACGACGACGTTTTCGAAGAAGAGAGTGTGCCGTTGCAGTTGAATCTTGGCAGCGTCGTAGCCAGAGCGAACAACAAGAGAGTGAGGTCCGGTTCTCCCGGAACGGCATCGTATCCGATGTGTCAGGTCGATAACTGCAGAGAGGATCTGTCCAAGGCGAAGGACTATCACCGAAGGCACAAAGTGTGTGAGGCTCATAGCAAAGCTTCCAAAGCGCTTCTCGCCAATCAAATGCAACGGTTCTGCCAGCAGTGTAGTAGGTTTCACCCGCTCTCCGAGTTCGATGAGGGAAAGCGTAGTTGTCGCCGGCGACTCGCCGGGCATAACCGTCGCCGGAGGAAAACTCAGCCGGAGGATGTTGCTCCCGCTACACCCGTACCCACCGCCGCCAATTTGGAAATTTTCAACTTGTTGACTGCCATAGCTGGAGCCTCTCAAGGAAAATTTGAGGAGAAAAGGTCACAAATTCCGGATAGAGAGCAGCTTGTGCAGATTCTCAATAGGATACCTTTGCCTGCTGATCTTGCAACCAAGTTGCTGGATGTTGGTAATGTCAATGGGAAAAAAGATCATGTGCAAATGCAGACTCCATCCGCCTATCATCATCATGACCAACTGAACCACTCCCCCTCTGCCCCATTAACTATGGACTTGCTTGCTGTTCTTTCCACCACTCTATCTGCCCCTGCTCCCGCCCCCAATGCTGTTGCATCACTATCTCAAAATCACAGTTGCAGTAGTGATGGTGGCAGTGACAAGTGTAGGGATAGTGCTGACCAGTCCAGAGGACAGCAATTCTTTTCAGTTGGTGGAGAAAGAAGCAGTAGCAGTTCGCAGTCTCCAGTTGAAGATTTAGATTGCCAGGAGGATGTTCGAGTTAATTTACCGCTGCAACTCTTTAGCTCCTCTCCAGAAGACAACAGCCTGCCAAAAATAACGTCTTCGCGGAAGTATTTCTCATCTGACAGTAGTAACCCCGTTGAAGAGAGGTCGCCATCGTCTTCTCCTGTTGTGGAGATGCAATTTGATTTGCAGGGTGGGGCTAGAGGTTTCCAGCCGGAGGGCATAATCTCAACTGGAAGAGGTGTTAACAGAGATAAAGAAGCTAGCCAAATTCATAGTTCTAATATCTCTCTTGACCTCTTTAAAGGGCCGAATAACAGGATCCAACAACCTAGTTCACTTCAAAGTGTTCCATTTCAAGCTGGGTATGCATCTTCGGGCTCTGATAATTCACCTCCCAGTTTGAATTCAGATGCGCAGGATCGAACTGGGAGGATAATGTTTAAACTATTTGACAAGCATCCTAGCCATTTCCCAGGAACATTGCGAACACAGATTTACAACTGGCTTTCTAGTAGGCCATCAGACATGGAGAGCTACATAAGGCCTGGTTGTGTGGTCCTATCAATTTATGCTACAATGCCTTCTGCTGCCTGGGTGAAACTAGAAGAAAACTTCCTCCAACGAGTTCATTCCTTAATTCAAAATTCTGATTCTGAATTTTGGAGGAATGGAAGATTTCTAGTTCATTCTGGCAGTCAGTTGGCTTCACACAAAGATGGGAATATACGCATATGCAAAACATGGAGAACATGGAAGTCTCCGGAGTTGATATCCATTTCTCCTTTGGCAATTGTTAGTGGACAAGAAACCTCTATTTCGTTGAAGGGTAGAAACCTGTCAACTCCTGGCACCAAGATTCATTGCACAGGTACTGGCTCTTACACATCGGCAGAAGTCATTGGATCGGCATATCCTGGTGTGACATATGATGAGATAAAGTTGAATGGTTTTAAAGTTCAGGATGCATCTCCTGGTGTTCTGGGTCGGTGTTTCATCGAGGTTGAAAATGGTTTCAAGGGTAACAGTTTTCCAGTGATAATAGCTAATGCTACCATTTGCAAGGAATTGAGACCACTGGAGTCTGAATTTGATGAGGAGGAACAGATATGTGATGCCATTTCAGAGGAACATGAACATCATTTTGGAAGGCCCAGGTCAAGGGAGGAGACTTTGCACTTTCTGAATGAGCTTGGCTGGCTCTTCCAAAGAGAAAGGTTCTCGTTTGGGCATGATGAGGTTCCAGCTTATTCGCTTGACAGGTTCAAATTTGTACTCACATTTGCTGTGGAAAGAGACTGTTGCATGGTAGTCAAAACCCTTCTGGATGTGCTGGTTGATAAACAGTTGGATGGGGAATGGTTGTCAACAAGATCAGTGGAGATGCTGAATGCAATTCAACTCTTAAATAGAGCAGTGAAAAGAAAGTGCATAAACATGGTTGATTTGCTCATCCACTATTCTATACCTAGCAAAAATGATACATCCCGGAAATATGTATTTCCACCGAATTTTGAGGGTCCTGGTGGTATTACACCCTTGCACTTGGCAGCATGCACATCGGGTTCTGAGAGTGTAGTTGACACTTTAACAAGTGACCCACAGGAGATTGGGTTGAAGTGCTGGGAATCCCTCGAGGATGCAAATGGACAGACTCCACGTGGTTATGCCATGATGAGAAACAATCATTCTTATAATGTGCTGGTTGCCCAAAAACTTGCCGATAGACAAAGAGGTGAAGTTTCGGTAAAAATTGAGAATGAGATAGAGCAACTGTCACTGAGAGTGGAGCATAAGCAAAAGCAAAGTAGTTACCTAGTCAAACGAAATAAGAATTCTTGTGCCAAGTGTGCAATTGCAGAAATCCACTATAACAGAAGAATTCCAGGTTCACAGAGCTTGCTTCACCGCCCCTTTATTTATTCAATGCTAGCTGTTGCTGCTGTCTGTGTGTGTGTATGTGTGTTCTTCCGTGGACACCCTTCCGTAGGCTCAGATGCTCCCTTCAGTTGGGAAAATCTGGGTTATGGCACAATGTAA 3033 0.4609 MEKVAPPPILMHKKRDLSYGVVREPQSESWSAKEWNWDSVRFVGKPLPSSNDDVFEEESVPLQLNLGSVVARANNKRVRSGSPGTASYPMCQVDNCREDLSKAKDYHRRHKVCEAHSKASKALLANQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVAPATPVPTAANLEIFNLLTAIAGASQGKFEEKRSQIPDREQLVQILNRIPLPADLATKLLDVGNVNGKKDHVQMQTPSAYHHHDQLNHSPSAPLTMDLLAVLSTTLSAPAPAPNAVASLSQNHSCSSDGGSDKCRDSADQSRGQQFFSVGGERSSSSSQSPVEDLDCQEDVRVNLPLQLFSSSPEDNSLPKITSSRKYFSSDSSNPVEERSPSSSPVVEMQFDLQGGARGFQPEGIISTGRGVNRDKEASQIHSSNISLDLFKGPNNRIQQPSSLQSVPFQAGYASSGSDNSPPSLNSDAQDRTGRIMFKLFDKHPSHFPGTLRTQIYNWLSSRPSDMESYIRPGCVVLSIYATMPSAAWVKLEENFLQRVHSLIQNSDSEFWRNGRFLVHSGSQLASHKDGNIRICKTWRTWKSPELISISPLAIVSGQETSISLKGRNLSTPGTKIHCTGTGSYTSAEVIGSAYPGVTYDEIKLNGFKVQDASPGVLGRCFIEVENGFKGNSFPVIIANATICKELRPLESEFDEEEQICDAISEEHEHHFGRPRSREETLHFLNELGWLFQRERFSFGHDEVPAYSLDRFKFVLTFAVERDCCMVVKTLLDVLVDKQLDGEWLSTRSVEMLNAIQLLNRAVKRKCINMVDLLIHYSIPSKNDTSRKYVFPPNFEGPGGITPLHLAACTSGSESVVDTLTSDPQEIGLKCWESLEDANGQTPRGYAMMRNNHSYNVLVAQKLADRQRGEVSVKIENEIEQLSLRVEHKQKQSSYLVKRNKNSCAKCAIAEIHYNRRIPGSQSLLHRPFIYSMLAVAAVCVCVCVFFRGHPSVGSDAPFSWENLGYGTM* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0222 1010 Pfam SBP domain 91 164 IPR004333 GO:0003677
Apr7g0222 1010 MobiDBLite consensus disorder prediction 155 175 - -
Apr7g0222 1010 MobiDBLite consensus disorder prediction 419 470 - -
Apr7g0222 1010 MobiDBLite consensus disorder prediction 310 334 - -
Apr7g0222 1010 ProSiteProfiles Zinc finger SBP-type profile. 88 165 IPR004333 GO:0003677
Apr7g0222 1010 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 14 24 1010 - -
Apr7g0222 1010 Gene3D - 753 955 IPR036770 -
Apr7g0222 1010 Gene3D - 81 152 IPR036893 GO:0003677|GO:0005634
Apr7g0222 1010 MobiDBLite consensus disorder prediction 285 335 - -
Apr7g0222 1010 MobiDBLite consensus disorder prediction 348 390 - -
Apr7g0222 1010 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 24 1010 IPR044817 GO:0003677
Apr7g0222 1010 SUPERFAMILY SBT domain 89 169 IPR036893 GO:0003677|GO:0005634
Apr7g0222 1010 Coils Coil 913 933 - -
Apr7g0222 1010 MobiDBLite consensus disorder prediction 348 470 - -
Apr7g0222 1010 SUPERFAMILY Ankyrin repeat 756 903 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0222 Apr-Chr7 7097202 7102814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0222 8 1010 SBP-box Gene Family AT1G20980 52.642 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Apr7g0222 SBP 1.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0222 - - gmx:100812180 1615.51