Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0210 ATGGATTCACTCCTCTCGGCTAAAAACCCTACCTCCCTCCCTCCACCGCCCGGAATCCCAATCTCGGCCACAACGATGGCGACAAATTCCAAAATCTCAACCCCAATTTTAATCCCAAAGTTAGAACCTTTGGACGAATGGGTGGTGACCCACACTCCCCAACAAGAAGAACAAGCCCGAGAAGCACTCGATAATACTTCAAACGGTTCCCTCGGCTTGGACCTCAGCCTCTTATGCGATGCTCCTTCCAACGAAACCAACCACTTATATTCCGACTTCAACCGACTCGTTGAGCTCTTCCGTGCCACTTTCCCCGAGGACTTGCAACACTTCGAAAATCCCGACCCCACTGCCAAAGGCTTCCAAAATGACTCTGAGGGTTTGCAGCAAATGCAAAACGGCGTCGTTCCCGACCAACTCCCCGAGGGGACGCATCAGATCTTAAACGACTCCGTTCCAGACCATGATTCGCGGGCCATTGTGCCCGCCCCGGCACAGGAGGGCTGGGACTCGTCGCCCGGGTCCATGTTCCCGCGGCGGCGATGCAAGGAGCTTGTTCGCGTCACGGATGTTGGCGCGAGGGAGCAGCGTCACTTCCGCCAAGCCGTTCGCCAGACGCGGATGCTGTATGATTCGATCCGCGTGCTGGCGACGGCGGAGGACGAGAAGAGGGTGGAGATGGGGCGGAAGGCACGTGGCGATTTGAGGGCTTCGGCATTGATGAAGAGCCGTGGTTTGTGGCTGAATCGTGATAAGAGAATTGTTGGTGCTATTCCTGGTGTTTGCATTGGTGATGTGTTTCTTTACAGAATGGAACTTTGTGTTGTAGGGTTGCATGGTCAACCTCAGGCTGGGATTGATTATCTTCCAGCTAGCATGAGTTCTAATGGTGAACCAATTGCCACTAGTGTTATTGTTTCTGGAGGATATGAGGATGATGTTGATGAGGGTGATGTTATCATCTATTCTGGCCATGGTGGCCAGGATAAGCATTGTAGGCAGGTTTTTCATCAGAAACTTGAAGGGGGGAACCTTGCAATGGAGAGGAGTATGCATTACGGGATTGAGGTCAGGGTGATTCGCGGGGTGCGCTATGAGGGCACTTCCTCTGCCTCTGGGAAGGTCTATGTTTATGATGGGTTGTATAGGATCCTTGAGTGTTGGTTTGATGTTGGCAAGTCTGGATTTGGAGTTTACAAGTATAAGCTGTGGAGGATTGATGGGCAGGCTAAGATGGGTAGCGTGGTTCTTAAGGAGGCGCTTATGCTTAGGAGGGACCCGTTGTGTTTTAAGCCCATGTGTTGTTTGTCTGTTGATCTATCAAATAAGAAGGAGAATGTAGCAGTTCGGCTTTTTAATGACATTGATCAGAGTCATGATCCTCTTTGTTATGAGTATCTTGTGAGGACCAACTTTCCTCAGTTTGTGTTTCATCAGACTGGTACGGCTATGGGTTGTGACTGTGTGGATGGTTGTGTTGATGGATGCTTTTGTGCTATGAAGAATGGGGGCGAGTTTCCTTATAATAATAGTGGGGTCCTCTTGAGAGGGAAGCCGTTAATTTTTGAATGTGGTCCTTTTTGCCGTTGTCCTCCCAATTGTCGGAATCGGGTCACACAAAAGGGGCTCAAAAATAGGTTGGAAGTGTTTAGATCTAGGGAAACTGGTTGGGGAGTTAGGTCCCTGGACCTAATTCAGGCTGGTGCCTTTATCTGTGAGTACACTGGGGTTGTTCTGACTAGGGACCAAGCACAAATTTTGGCTATGAATGGTGATTCATTAATATATCCAAATCGGTTCACTGATAGGTGGGCAGAATGGGGGGATTTGTCTCTCATAGACTCCAATTATGTGCGTCCTTCATTTCCATCGATTCCTCCTTTAGATTTTGCTTTGGATGTGTCAAGAATGAGGAATGTTGCTTGCTATATTAGTAATAGTCCAACTCCAAATGTGTTGGTTCAGTTTATTCTGTATGATCACAATAATTTGATGTTCCCTCACCTTATGCTGTTTGCAATGGAGAGCATCCCTCCAATGAGAGAGCTCAGCCTTGATTATGGGGTAGCTGATGAGGTGACAGGAAAGCTCTCTATATGTAATTGA 2106 0.4843 MDSLLSAKNPTSLPPPPGIPISATTMATNSKISTPILIPKLEPLDEWVVTHTPQQEEQAREALDNTSNGSLGLDLSLLCDAPSNETNHLYSDFNRLVELFRATFPEDLQHFENPDPTAKGFQNDSEGLQQMQNGVVPDQLPEGTHQILNDSVPDHDSRAIVPAPAQEGWDSSPGSMFPRRRCKELVRVTDVGAREQRHFRQAVRQTRMLYDSIRVLATAEDEKRVEMGRKARGDLRASALMKSRGLWLNRDKRIVGAIPGVCIGDVFLYRMELCVVGLHGQPQAGIDYLPASMSSNGEPIATSVIVSGGYEDDVDEGDVIIYSGHGGQDKHCRQVFHQKLEGGNLAMERSMHYGIEVRVIRGVRYEGTSSASGKVYVYDGLYRILECWFDVGKSGFGVYKYKLWRIDGQAKMGSVVLKEALMLRRDPLCFKPMCCLSVDLSNKKENVAVRLFNDIDQSHDPLCYEYLVRTNFPQFVFHQTGTAMGCDCVDGCVDGCFCAMKNGGEFPYNNSGVLLRGKPLIFECGPFCRCPPNCRNRVTQKGLKNRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVVLTRDQAQILAMNGDSLIYPNRFTDRWAEWGDLSLIDSNYVRPSFPSIPPLDFALDVSRMRNVACYISNSPTPNVLVQFILYDHNNLMFPHLMLFAMESIPPMRELSLDYGVADEVTGKLSICN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0210 701 Pfam Pre-SET motif 441 537 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0210 701 SUPERFAMILY SET domain 430 689 IPR046341 -
Apr7g0210 701 SMART G9a_1 251 409 IPR003105 -
Apr7g0210 701 Pfam SAD/SRA domain 255 409 IPR003105 -
Apr7g0210 701 SMART set_7 545 694 IPR001214 GO:0005515
Apr7g0210 701 Gene3D - 253 413 IPR036987 -
Apr7g0210 701 SMART preset_2 437 529 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0210 701 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 33 698 - -
Apr7g0210 701 Pfam SET domain 556 688 IPR001214 GO:0005515
Apr7g0210 701 ProSiteProfiles SET domain profile. 545 688 IPR001214 GO:0005515
Apr7g0210 701 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 99 701 IPR025794 GO:0016571
Apr7g0210 701 ProSiteProfiles Pre-SET domain profile. 484 542 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0210 701 SUPERFAMILY PUA domain-like 237 418 IPR015947 -
Apr7g0210 701 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 33 698 - -
Apr7g0210 701 ProSiteProfiles YDG domain profile. 256 405 IPR003105 -
Apr7g0210 701 Gene3D SET domain 414 701 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0210 Apr-Chr7 6790300 6796110 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0210 190 690 Su(var)3-9 homologs AT5G04940 38.235 7.04e-105 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr7g0210 SAD_SRA 6.1e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0210 K11420 - gmx:100795514 1052.35