Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0191 ATGGCTGTGGTGGGTGTTCCACTTCCCTCAAACCTTTTGCCAACTGATTCAAGCCCTGAATGGATGAGCAAAGCAGATAATGCATGGCAGCTAATGGCTGCAACACTAGTGGGCATGCAAAGTGTGCCGGGGCTTATAATTTTGTATGGTGGAGCAGTTAAGAAGAAATGGGCAGTGAATTCAGCATTCATGTCACTCTATGCTTTTGCATGTGTGTTTTTCTGTTGGGTTGTGTGGGGATATAGAATGTCTTTTGGTGATCAACTTTTTCCCTTTTGGGGAAAGCCTGCTGGGGCACTAGATGAGGTTTATCTTTTCAAGCCAGCATTTCTGGGGCTCTTCCCAAATGCTACAATGGTGTATTTCCAATGTGTCTTTGCTGCCATTACTTTAATTCTCATTGCTGGGGCTTTGTTGGGGCGCATGAACTTTTATGCTTGGATGATGTTTGTGCCTTTGTGGCTCACATTCTCTTACACCTTCACAGCTTTTAGCATATGGAGCACTAATGGTTTTCTATCCAAAATGGGGATAATCGATTACTCAGGTGGATATGTCATCCATTTGTCTTCTGGGGTTGCTGGATTCACAGCTGCATTTTGGGTTGGGCCACGCCTAAACAAGGACAGGGAAAGGTTCCCTCCAAACAACATCCTTCTTATGTTAGCAGGGGCAGGGCTGTTGTGGATGGGGTGGACAGGCTTCAACGGGGGAGACCCTTACTCAGTTGGCATTGATGCTTCCTTAGCTGTGTTGAATACTCATGCTTGCACTGCCACCAGTTTACTCACTTGGGTCATCCTTGATGTCATTTTCTTCCGAAAGCCTTCTGTAATTGGTGCTGTTCAAGGCATGATCACTGGTTTGGTTTGCATAACCCCTGCAGCAGGGGTTGTGCAAGCATGGGCAGCACTTATAATGGGGATCTTCTCAGGCTCAATTCCTTGGGTCACCATGATGGTGATCCACAAGAGATCGAAGTTGCTGCAGAAGGTTGATGATACAATGGCAGTGTTGCACACTCATGCCATTGCAGGAACCTTAGGAGGACTCCTCACTGGACTCTTTGCAGAGCCAAAACTGAACAAATTGTTCTACGGAAATTACAATCAATACGTTGGTCTATTTTATGGCCTCAATATGAACATGACTGGAACCGGGTTCAGGCAAATGGGAATCCAAATCCTTGGGATTTTCTTTGTTGTCCTTGTTAATCTTGTAAGCACAAGTTTGATTTGCCTCTTCATTCGACTTTTTGTTCCGTTAAGAATGTCTGAAGAGGACATGGAAATAGGTGATGAGGCTGCTCATGGTGAAGAAGCATATGCAATCTGGGGTCAGGGTGATAAGCTTGAAAATTCAAGCTCAAAGTATGGAAGTTCATTATATGATGATGTTGAGTCAGGGGCCAACAAGAACAAACGTGGTGGCATGGTTGAGATGATGTAA 1449 0.4493 MAVVGVPLPSNLLPTDSSPEWMSKADNAWQLMAATLVGMQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVVWGYRMSFGDQLFPFWGKPAGALDEVYLFKPAFLGLFPNATMVYFQCVFAAITLILIAGALLGRMNFYAWMMFVPLWLTFSYTFTAFSIWSTNGFLSKMGIIDYSGGYVIHLSSGVAGFTAAFWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVGIDASLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQAWAALIMGIFSGSIPWVTMMVIHKRSKLLQKVDDTMAVLHTHAIAGTLGGLLTGLFAEPKLNKLFYGNYNQYVGLFYGLNMNMTGTGFRQMGIQILGIFFVVLVNLVSTSLICLFIRLFVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLENSSSKYGSSLYDDVESGANKNKRGGMVEMM* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0191 482 PANTHER AMMONIUM TRANSPORTER 6 482 - -
Apr7g0191 482 ProSitePatterns Ammonium transporters signature. 180 205 IPR018047 GO:0008519|GO:0016020|GO:0072488
Apr7g0191 482 Gene3D Ammonium transporter AmtB like domains 12 446 IPR029020 -
Apr7g0191 482 PANTHER AMMONIUM TRANSPORTER MEP2 6 482 IPR001905 GO:0008519|GO:0016020|GO:0072488
Apr7g0191 482 PRINTS Rhesus blood group protein signature 123 139 IPR002229 GO:0005887
Apr7g0191 482 PRINTS Rhesus blood group protein signature 219 237 IPR002229 GO:0005887
Apr7g0191 482 PRINTS Rhesus blood group protein signature 250 272 IPR002229 GO:0005887
Apr7g0191 482 Pfam Ammonium Transporter Family 28 442 IPR024041 GO:0008519|GO:0016020|GO:0072488
Apr7g0191 482 TIGRFAM amt: ammonium transporter 26 442 IPR001905 GO:0008519|GO:0016020|GO:0072488
Apr7g0191 482 SUPERFAMILY Ammonium transporter 21 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0191 Apr-Chr7 6177164 6182115 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0191 117 468 Inorganic Solute Cotransporters AT2G38290 61.364 7.66e-144 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0191 K03320 - gmx:100787856 856.284