Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr7g0188 | ATGGTGATGGAGGGTATCGATAATTGTGGGAGTAAAAAGCGTAAACGAGGGTTTGCAAAAAAGCTTCAAGTCAATGAAAGTGTGGAGGTGAGGAGTGAAGAGGAGGGCTTGCTAGGATCATGGCACCCGGGGACAGTTATCTATTGTGGGAAGCTGAAACGCCATATCAAATATAAGAATATTTTGGAAAATAATGGGTTGAATTATCTTTTGGACGTGGTGAATGTTCCAAAAGCTTTGGACGGTGAAATTGAATCTTCGTATTGCTATAAGCGTGGCTTCATTAGGCCAATTCCTCCTTTTGTTGATTTTGGGACATTGGACCTTAAATTTGGGCTGTGTGTTGATGTGATCCATAAGGAAGCTTGGTGGGAAGGTGTCATATTTGATCATTGTGATGGAATGAAAACAAGGAGTGTGTTTTTCCCTGATTTGGGAGATGAAATGCAAATTGAAATTCATCAATTGCGGATTACTCAGGACTGGGATGAAGTTACAGGAGAGTGGGAGCAACGAGGGAACTGGGCGTTTCTTGAATTGGTTGAGGAGTGTGAGAGGGAATCTCTTGTTGCTGTTTCAGCTAAGCAAATTTGGTATGATGTACAAGGAAAAGAGGAATTTTCTATGATTGGAGACTGGACATATAATGTGAAGTACTTGTGGAAAAACTTGGTAATGGAGGTAGTAAATGATTACTTAACTCTTACAGTAAAATATGTTATCTCAATCTTAAACCTTCCAGGGAATTTAATAAATGAAACACGAGAGTTGAATTCAGATGAAGCTATGGCTAATGTTGACTTCAACATGACCTTGACTGATAAGGAAATTGATGTGCTGAAAGAACCTATTCCTCCAGTTGAAGTAGTTTCAGGTGCTAATTGTTTTGGAAGAAAAAGAAAACATAGATCCTCAACCCATTTAAGGTCCACATATTGGACACCTCTGATGTTTTCTGAAGTTGAATTATGTCCTGATGCTGTTAGGCAATATGCACTTGGCTCAAGTAAGAGAAGTAGGGAACTTTGGAAGGAAAGACTACAAAAGCATCTTGCATATCTTGGATGGGAAATTGAGTCATCAAATAAATTTAATATCAAACGTTACAGGTATAGATCGCCTGATGAACTAGGCCGAAAGGTTTACTTGTCACTTGTTGAAGTTTGTAAAAGTATGCTAGAGGACCCCAACAAAAACAACTCTTTGCAGTCCCAAAAGAGTAGAATGCATCTTACAGTTGACTCTCATCTATCAAATGTGATTCCAAATCCATCCCAAAAAAATCAGGATCTAAATATCCTTCCTCCCAGTGAAGTTGAACCAGAGTTTTGTCATCAAGCTGTTGTGGAATATTATTATGCACATCAATCCAACAACAATAAGGTTGATAAAAAAAAGTTGATACTGAAAGCAAAGAATCACCTGTTAGCAGAAGGATGGAATTTTGAATATCCACCTCCAACTAATAAGAGAAGAGGAATAAGATACATGTCTCCACAAAATAAGAGATTCACAACACTCCATGCAGCATGCAGATTTTGCATTGAAGAGGGTATTCCTGAATGGGCTATATCTGATATGCAGCCTTCAAATGTCTCTGGCACTAATGAAGAAAATGTTGATCAGGTTTGGAGTGGTGAATTATCACATAGAGTATCCCAATTTCTTCCAAAACACCCTGAGTTAGATGCTATGGATGGTGCTGCTTCAAATAGATTCACTTCAAATCGAAAGAGGAAATGCTTGAGGAATTCAAAATCTAATCTACGTAAGTGTCAAAGCAATGGATTGCCTCCAAGCATGCTAAGATCAAATAAGAGGGTTCAAAATGTGTCTGCTTGTCCATCACAACATAAACCTCTAAATGTTATGTCTTGGTTGATAGACAGCAACGTGGTCTTACCAAGGTCTAAGGTTTATTATAAGGCAAAAGGAAGGCAGCGTACGATTCATACAATGGCTGTAGGGAAAATAACTCACGATGGAATCAAGTGTAACTGTTGCATGAAAATATACAGTCTTGTTGGCTTTGAACATCATGCTAGTGGCATTATTACTTGCAGGCCCTCTTCCAGTATCTTTTTGGAAGATGGTAGATCGCTCTTGGATTGCCAAATGCAAATAATGCAAGATCATAAAACAAACCAAGCTAGTGAAAAACCATTCAGTGAGTTGTGTCAAGGAGACAACGATTACATTTGTTCTGTTTGCCACGACGGTGGTGAACTTATTTTATGTGATCAATGTCCATCTTCGTTCCATAAGATGTGCCTTGGTTTGAAGGATGTCCCTGATGGCATTTGGGTTTGTCCAACGTGTTGTTGTGGGATTTGTGGCCAAAACAAAATCCATGAAGATGAGGATGAACATTTCCGTACTTGTGCTCAGTGTGAACATAAATATCACTTTAGATGCCTTAAAAATGAAGCTGAAGATATATCAAGATATCGGAAAACCTGGTTCTGTGGTAAAGACTGTGAAAAGATATATGAAGGCCTTCACAAACTCCTAGGAGTTCCAGTTTCAGTGGGTGTGGACAATCTAACATGGACATTGGTGAAGTTCATCAACTCCGAGAGTTGTGATCTTGGTAGTACTGAAAGTCACTTAGCGGCAGAAAGTTTCAGCAAACTCAATCTTGCTCTATCTCTGATGCATGAATGTTTTGAGCCCCTAAAGGAACCTTTCTCTAGCAAAGATCTCATGGAAGATGTTATGTTCAGCAGTTGGTCAGAGCTTAACCGATTAAATTTCCAGGGTTTCTATACTGTACTACTTGAGAGAAATGAAGAACTAATTAGTGTGGCAATTATTAGGGTCTATGGGAAGAAGGTAACAGAAGTACCCCTTGTTGGTACCCGATTACAGTATCGTCGACATGGAATGTGTAGCATTTTAATGAATGAGCTAGAAAAGAAGCTCATGCAGTTAGGTGTGGAGAGGCTTGTTTTGCCTGCTATTCCTAGCATGCTAGAAACATGGACTGGATCTTTTGGCTTTGCAAAGATGACAAGCTCTGAGAGATCTCAATTTCTGGACTATACTTTCTTAGATTTTCAGGGTACCATCATGTGCCAGAAGCTGTTGATGAAGATTCATTCTCCAGATTCTGTATGTTTAATAGGTTCACAACAGAAATGTGAATCTGGAAGTTGCAGTGCTAACTACGATAAGTCTTGTCAAATATCTGAAGTATACCAAGAAGAGGAGATTAACAATGGAGGCATGCTGAACCAACAAATAGGAAGCTGTGGTCATCATGGCTATGGTGCTATTGACCCCATCACCATGGAGGAGCAACCAAGTCCTAGAGATCATCAACAGTGCCAGAATGGAACCAGCTCACAGTTTTCTCTTGAAAACCAAGCTGGTAACAGGGAACTAAATTAG | 3390 | 0.3935 | MVMEGIDNCGSKKRKRGFAKKLQVNESVEVRSEEEGLLGSWHPGTVIYCGKLKRHIKYKNILENNGLNYLLDVVNVPKALDGEIESSYCYKRGFIRPIPPFVDFGTLDLKFGLCVDVIHKEAWWEGVIFDHCDGMKTRSVFFPDLGDEMQIEIHQLRITQDWDEVTGEWEQRGNWAFLELVEECERESLVAVSAKQIWYDVQGKEEFSMIGDWTYNVKYLWKNLVMEVVNDYLTLTVKYVISILNLPGNLINETRELNSDEAMANVDFNMTLTDKEIDVLKEPIPPVEVVSGANCFGRKRKHRSSTHLRSTYWTPLMFSEVELCPDAVRQYALGSSKRSRELWKERLQKHLAYLGWEIESSNKFNIKRYRYRSPDELGRKVYLSLVEVCKSMLEDPNKNNSLQSQKSRMHLTVDSHLSNVIPNPSQKNQDLNILPPSEVEPEFCHQAVVEYYYAHQSNNNKVDKKKLILKAKNHLLAEGWNFEYPPPTNKRRGIRYMSPQNKRFTTLHAACRFCIEEGIPEWAISDMQPSNVSGTNEENVDQVWSGELSHRVSQFLPKHPELDAMDGAASNRFTSNRKRKCLRNSKSNLRKCQSNGLPPSMLRSNKRVQNVSACPSQHKPLNVMSWLIDSNVVLPRSKVYYKAKGRQRTIHTMAVGKITHDGIKCNCCMKIYSLVGFEHHASGIITCRPSSSIFLEDGRSLLDCQMQIMQDHKTNQASEKPFSELCQGDNDYICSVCHDGGELILCDQCPSSFHKMCLGLKDVPDGIWVCPTCCCGICGQNKIHEDEDEHFRTCAQCEHKYHFRCLKNEAEDISRYRKTWFCGKDCEKIYEGLHKLLGVPVSVGVDNLTWTLVKFINSESCDLGSTESHLAAESFSKLNLALSLMHECFEPLKEPFSSKDLMEDVMFSSWSELNRLNFQGFYTVLLERNEELISVAIIRVYGKKVTEVPLVGTRLQYRRHGMCSILMNELEKKLMQLGVERLVLPAIPSMLETWTGSFGFAKMTSSERSQFLDYTFLDFQGTIMCQKLLMKIHSPDSVCLIGSQQKCESGSCSANYDKSCQISEVYQEEEINNGGMLNQQIGSCGHHGYGAIDPITMEEQPSPRDHQQCQNGTSSQFSLENQAGNRELN* | 1130 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr7g0188 | 1129 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 868 | 1029 | IPR000182 | GO:0016407 | |
| Apr7g0188 | 1129 | Pfam | PHD-finger | 733 | 774 | IPR019787 | - | |
| Apr7g0188 | 1129 | ProSitePatterns | Zinc finger PHD-type signature. | 734 | 773 | IPR019786 | - | |
| Apr7g0188 | 1129 | ProSiteProfiles | Zinc finger PHD-type profile. | 731 | 776 | IPR019787 | - | |
| Apr7g0188 | 1129 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 775 | 829 | IPR013083 | - | |
| Apr7g0188 | 1129 | PANTHER | PHD ZINC FINGER PROTEIN | 5 | 262 | - | - | |
| Apr7g0188 | 1129 | PANTHER | PHD ZINC FINGER PROTEIN | 288 | 1073 | - | - | |
| Apr7g0188 | 1129 | SMART | agenet_At_2 | 20 | 82 | IPR014002 | - | |
| Apr7g0188 | 1129 | SMART | agenet_At_2 | 107 | 164 | IPR014002 | - | |
| Apr7g0188 | 1129 | SMART | ring_2 | 734 | 773 | IPR001841 | - |
Showing 1 to 10 of 24 entries
Duplication type information
Functional genes information
Pathway information