Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0166 ATGGAGAAGATTTGCTTCAGTTTTGCCTTAGTGTTGTCTTTCCTCCATTTCATTGCCTCCACGGAGATAAGCAACAGCAATTATACGATAGACCAATCTGCACTGTTGGCCTTCAAATCTTATATCACTTTGGATCCTCAACACATATTGGCCAGCAATTGGTCTACTAAATCCTCTGTGTGCAATTGGTTTGGGGTCACTTGTGATACCAACTATGGAAGGGTCACGAGCCTAACTCTAACAAGCATGAATTTAAGTGGTTCCCTTCCACCCCAATTAGGAAACTTAACTTTTCTCGTTCATCTTGATCTTCGCAACAATGAGTTTCATGGGACTCTACCAAGAGAGTTGGCCTTGTTACCTAGATTGAAGGTGGTCAACTTGTGCACTAACCAATTTGGAGGTCAATTCCCAACCTGGGTGGGGGAGTTATCTAAACTCCACCATTTGAGTCTTTGTAATAACAGCTTTTCGGGTTCAATTCCCAAATCCCTATCTAAGTTGTTGGAGTTGGAGACTTTGGATTTGAGCTTTAATTTCGTAGATGGGAACATTCCACCTGAGCTTGGAAGGCTTCATAATTTGACAGTTTTGGATTTGGCACACAATCAGCTATCCGGTGACATCCCTTCTTCAATCTTCAACATCTCCACGTTGCAAGAGCTTGATTTCTCATATAATTATTTATCAGGAAGCATCCCTCAAGAAGTTGGTGACCTACGACAACTAAGAAGTATAAATGTGAGCAAAAATAAACTTTATGGTTCGATACCATCGTCCTTATTCAATGTGCCTACCCTTCAAGAGATTCAATTATTTTATAATAACCTATCTGGTTCTTTGCCATCGGATATGTGTCATGGACTTCCAATGCTTGAAGAGCTTGACCTCTCTGGAAATGCAATTTATAGTCAAATTCCATCAAGTTTGCATCAATGTAAAGAGCTCAAATATCTGAAGATGATCAGCAACAGATTTTATGGTCATCTACCTAATGATATCGGGAGATTATCTATGCTTGAGGAGTTAGATTTTAGTAACAACAATCTAACAGGTACCATACCTTTTGAGATGGGTGACTATTTAAGAAAACTTGAGAAATTGCATTTGCAAGGTAATAGATTAAGAGGATCTATTCCTACAAATATTTTCAACATCTCAAGGTTGCAAAGCTTGTCATTGTCAAATAACCAACTCTCAGGAAATCTTCCAATTTATGGGCATCATAGCCTATCCAACCTCAAATTTTTATACGTGTCAGCCAATAATCTTAGTGGAGAAATTCCAAAGAGCCTTTTCAATGCTTCAATGCTTCTTCAACTAGTGCTTGCCAACAATTCATTTTCGGGAGTTATACCTGACTCAGTTGGGAATTTAAGAAACCTCGAGTCCCTTTATTTGATAGGAAATAAGTTGACTAGTGATCCAGCTTCTCCAGAAATGAGTTTTCTCACTTCATTAACAAAGTGTAGACAATTGAAGAAAATTTTATTGTCACTGAATCCTCTTGATGGGACACTTCCAAATTCAATCGGAAACCTATCAAATTCTCTTCAAATTTTCGATGCCTGGAGTTGTAATATTAAGGGTAGAATTCCCTCGCAGATTGGCAATTTGAAGAACTTGTATGACATAAACTTGAATGAGAACCAACTTAGTGGACAGCTTCCTAGTACAATTGGTGCTTTGCTATCGCTTCAACGTTTGGATCTTTCAGACAACAAACTAAATGGCTCAATCCCAAGTCAAATTTGTCAACTAATAAATTTGAATGAGTTGCGTCTTAGCAAAAATCAAATTTTTGGGCTAGTGCCAGGATGCATGGGGAGTCTTGGTTCTTTAAGAAATCTTTACCTGGACTCCAATAACTTGAACTCTACAATACCTCTTTCTCTTTGGAGCCTCACTGATATCTTGGAGGTGAATTTATCCTTTAATAATTTTGGTGGGTCTTTACCAATTGAAATAGATGGGATGAGTGCTGTGATAAAACTTGATATATCTAACAACCATCTTTCAGGAAAGCTTCCTAGTGAAATTGGTGGCATGCAAAAGTTAATGAACCTATCATTAGCTAATAATATGTTACAAGGGCCAATTCCTGATTCAGTTGGGAATATGCTAAGCTTGGAAGTTTTGGACCTTTCCCACAATCTTTTATCAGGCAACATCCCCAAATCAATGGAGAAGCTTCTTTATCTCAAATTTATCAACTTGTCTTATAATAGACTACAAGGTGAAATTCCTTCTGGTGGTAGACTTGTAAATTTCACATCTCAATCATTCATGATGAATGGTGCACTTTGTGGGAGACCTGAACTAAAAGTGCAACCATGTCCTAGTAATGGGGTTAGACATAATAGTAAAGGCAAAAAGCTTGTACTGAAATTGATTATACCCATAGTTGCATCAAGCATTTTCATTGGTTGCATAATTTTTCTTATACACAGAAGAGCGTACAATGAAGGATCAACAAATATGGATTTACCGATATTTCAATTTCAAAATCGAATTTCGTACTATGAACTTGTGGAGGCAACACAAAAATTTCATGAGAGCAATCTTCTTGGAAGAGGGAGTTTTGGTTCTGTGTACAAAGGTGAACTTTCTAATGGAGGGGTGATTGCAATTAAAGTATTCAATTTGGATGTGCAAGAAGCATCAAGGAGTTTTTATGTAGAATGTGAAGCAATGCGCAATCTTCGTCATCGTAATCTAGTCAAAGTCATTACTAGTTGTTCTAATACTGTTGATTTCAAAGCCCTGGTAATGGAATTTGTGCCAAATGGGAACCTAGAGAAATGGTTATATTCTCATAGCAACTCCCTAGGTTTCATAGAGAGGTTGGATATAGCAATTGATGTTGCATCTGCCTTAGAGTATCTCCATCATGGTAACTCAAAACCTGTGGTACATTGCGACTTAAAGCCAAGCAATGTCTTGCTGGATGAAAATATGGTCGCTCATGTTTGTGACTTTGGCATTGCTAAACTCTTGGAAGAAGGACAATCTCAATTACACACCAACACTTTAGCAACACTTGGTTATATTGCACCAGAATATGGAACTGAAGGTGTTGTGTCTGTTAAAGGAGATGTATATAGTTATGGCATTATGTTGACGGAAGTATTTACAAGAAAGAAGCCAACTGATGAAATGTTTGAAGAGGGACTAAGCTTAAGGTCATGGATTCAAGAATCAATGCCACATGGGATCACTCAGGTAGCAGACCCTAATTTGTTAGAAGGAGATGAACAATTTAACTATGCCAAAGAAACAACTTTAGTAAACATCATGCAGTTGGCTTTGAGTTGCTCTGTAGACTCCCCTGAAGATAGAATGAGTATGTTGGAAGTCTTAGGTCGCTTAAACAAAATCAAAACAATATTGCTGCAAATGATAAATTCCAATTAA 3414 0.3761 MEKICFSFALVLSFLHFIASTEISNSNYTIDQSALLAFKSYITLDPQHILASNWSTKSSVCNWFGVTCDTNYGRVTSLTLTSMNLSGSLPPQLGNLTFLVHLDLRNNEFHGTLPRELALLPRLKVVNLCTNQFGGQFPTWVGELSKLHHLSLCNNSFSGSIPKSLSKLLELETLDLSFNFVDGNIPPELGRLHNLTVLDLAHNQLSGDIPSSIFNISTLQELDFSYNYLSGSIPQEVGDLRQLRSINVSKNKLYGSIPSSLFNVPTLQEIQLFYNNLSGSLPSDMCHGLPMLEELDLSGNAIYSQIPSSLHQCKELKYLKMISNRFYGHLPNDIGRLSMLEELDFSNNNLTGTIPFEMGDYLRKLEKLHLQGNRLRGSIPTNIFNISRLQSLSLSNNQLSGNLPIYGHHSLSNLKFLYVSANNLSGEIPKSLFNASMLLQLVLANNSFSGVIPDSVGNLRNLESLYLIGNKLTSDPASPEMSFLTSLTKCRQLKKILLSLNPLDGTLPNSIGNLSNSLQIFDAWSCNIKGRIPSQIGNLKNLYDINLNENQLSGQLPSTIGALLSLQRLDLSDNKLNGSIPSQICQLINLNELRLSKNQIFGLVPGCMGSLGSLRNLYLDSNNLNSTIPLSLWSLTDILEVNLSFNNFGGSLPIEIDGMSAVIKLDISNNHLSGKLPSEIGGMQKLMNLSLANNMLQGPIPDSVGNMLSLEVLDLSHNLLSGNIPKSMEKLLYLKFINLSYNRLQGEIPSGGRLVNFTSQSFMMNGALCGRPELKVQPCPSNGVRHNSKGKKLVLKLIIPIVASSIFIGCIIFLIHRRAYNEGSTNMDLPIFQFQNRISYYELVEATQKFHESNLLGRGSFGSVYKGELSNGGVIAIKVFNLDVQEASRSFYVECEAMRNLRHRNLVKVITSCSNTVDFKALVMEFVPNGNLEKWLYSHSNSLGFIERLDIAIDVASALEYLHHGNSKPVVHCDLKPSNVLLDENMVAHVCDFGIAKLLEEGQSQLHTNTLATLGYIAPEYGTEGVVSVKGDVYSYGIMLTEVFTRKKPTDEMFEEGLSLRSWIQESMPHGITQVADPNLLEGDEQFNYAKETTLVNIMQLALSCSVDSPEDRMSMLEVLGRLNKIKTILLQMINSN* 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0166 1137 Gene3D Ribonuclease Inhibitor 485 780 IPR032675 -
Apr7g0166 1137 Pfam Leucine rich repeat 685 744 IPR001611 GO:0005515
Apr7g0166 1137 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Apr7g0166 1137 Pfam Leucine rich repeat 121 179 IPR001611 GO:0005515
Apr7g0166 1137 Gene3D Ribonuclease Inhibitor 287 361 IPR032675 -
Apr7g0166 1137 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Apr7g0166 1137 CDD STKc_IRAK 856 1126 - -
Apr7g0166 1137 SUPERFAMILY RNI-like 77 401 - -
Apr7g0166 1137 Gene3D Ribonuclease Inhibitor 362 484 IPR032675 -
Apr7g0166 1137 Gene3D Transferase(Phosphotransferase) domain 1 927 1134 - -
Apr7g0166 1137 Pfam Protein kinase domain 850 1120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0166 1137 Gene3D Phosphorylase Kinase; domain 1 832 926 - -
Apr7g0166 1137 SUPERFAMILY Protein kinase-like (PK-like) 824 1128 IPR011009 -
Apr7g0166 1137 SMART serkin_6 850 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0166 1137 ProSiteProfiles Leucine-rich repeat profile. 194 216 IPR001611 GO:0005515
Apr7g0166 1137 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 362 1132 - -
Apr7g0166 1137 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 195 404 - -
Apr7g0166 1137 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 222 - -
Apr7g0166 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 970 982 IPR008271 GO:0004672|GO:0006468
Apr7g0166 1137 SUPERFAMILY RNI-like 409 750 - -
Apr7g0166 1137 Gene3D Ribonuclease Inhibitor 29 183 IPR032675 -
Apr7g0166 1137 PANTHER - 362 1132 - -
Apr7g0166 1137 PANTHER - 195 404 - -
Apr7g0166 1137 PANTHER - 6 222 - -
Apr7g0166 1137 ProSitePatterns Protein kinases ATP-binding region signature. 856 878 IPR017441 GO:0005524
Apr7g0166 1137 SMART LRR_typ_2 411 435 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 362 386 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 563 587 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 144 168 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 611 635 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 337 361 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 659 683 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 96 120 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 289 313 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 707 731 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 459 484 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 192 216 IPR003591 -
Apr7g0166 1137 SMART LRR_typ_2 240 264 IPR003591 -
Apr7g0166 1137 Gene3D Ribonuclease Inhibitor 184 286 IPR032675 -
Apr7g0166 1137 SMART LRR_sd22_2 386 416 - -
Apr7g0166 1137 SMART LRR_sd22_2 707 726 - -
Apr7g0166 1137 SMART LRR_sd22_2 289 312 - -
Apr7g0166 1137 SMART LRR_sd22_2 563 592 - -
Apr7g0166 1137 SMART LRR_sd22_2 337 370 - -
Apr7g0166 1137 SMART LRR_sd22_2 168 183 - -
Apr7g0166 1137 SMART LRR_sd22_2 192 218 - -
Apr7g0166 1137 PRINTS Leucine-rich repeat signature 566 579 - -
Apr7g0166 1137 PRINTS Leucine-rich repeat signature 707 720 - -
Apr7g0166 1137 ProSiteProfiles Protein kinase domain profile. 850 1130 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0166 Apr-Chr7 5417177 5423682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0166 10 1127 Receptor kinase-like Gene Family AT5G46330 34.957 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Apr7g0166 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0166 - K13420 lja:Lj6g3v0938090.1 1160.59