Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0143 ATGTTTCCGAGGGAGAATGAGAGTAACGGCTATCAGCAGCAGCCACAGGGAATGGGTCACAGTCACAGAGAGCGAGCCCGTCGTGCCACTCGCCGGTCACGTGCCTCCGCTTCCACACACAATCACCTTAGGGTTTGTGATCAACAACAACAGCACCATCCACCTCCTTGCACTGACTTCGACATGGCCTATTTCCATTCCTACGCTCACCTTGGTATCCACCAAGAGATGATAAAGGATCGTGTGCGGACTGAAACTTATAGAGAAGCAATTATGCAGCATCACAGTTTTATTGCTGGAAAGGTTGTGGTTGATGTTGGATGCGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAACGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGGCAAATGAAGTTGTGAAAGCAAATAACTTGTCTGATGTTGTTGTTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCTGAATGGATGGGCTACATGCTTCTATATGAGAGCATGCTTGGGAGTGTTATTACTGCTAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTCACACATCCTGACAGATACAGTGAAAGCGTTGACTTTTGGCGCAATGTTTATGGAATTGATATGTCTGCCATGCTATCATTAGCTAAACAATGTGCATTTGAAGAACCTTCTGTTGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACACGTGGTGAAATATATTGATTGTTATTCTGTTACCAACCATGAGTTAGAATCTGTAACAACCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTTAACGGGTCTGCAATAGCACCAACCAATTATCATTCGTCAGCTTCATTTATCGACAATCATCAGATGAATGGTAGTCAGAGAAAAAAGCGAACAAATCCAAATGAAGCGCTGGTCCTGTCCACAGCACCTGAGGACCCTCCCACACATTGGCAGCAGACAATGATATACTTTTATGATCCGATAGAGCTGGAACAAGATCAACTAATTGAAGGTTCAGTGACATTGTCACAAAGCAAGGAAAATGCTCGATTTATGAATATTCACCTTGAGTATACTTCTGGTGGTCGATCATATGTGAAAGAGTCCGTTATGAGATGA 1239 0.431 MFPRENESNGYQQQPQGMGHSHRERARRATRRSRASASTHNHLRVCDQQQQHHPPPCTDFDMAYFHSYAHLGIHQEMIKDRVRTETYREAIMQHHSFIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQANEVVKANNLSDVVVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLILPSSATLYMAPVTHPDRYSESVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENVLTWPHVVKYIDCYSVTNHELESVTTKFKFNSMMRAPLHGFAFWFDVEFNGSAIAPTNYHSSASFIDNHQMNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTMIYFYDPIELEQDQLIEGSVTLSQSKENARFMNIHLEYTSGGRSYVKESVMR* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0143 412 Pfam Ribosomal protein L11 methyltransferase (PrmA) 99 173 - -
Apr7g0143 412 MobiDBLite consensus disorder prediction 1 52 - -
Apr7g0143 412 CDD AdoMet_MTases 103 202 - -
Apr7g0143 412 MobiDBLite consensus disorder prediction 24 38 - -
Apr7g0143 412 Gene3D - 205 411 - -
Apr7g0143 412 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 61 412 IPR025799 GO:0016274|GO:0018216
Apr7g0143 412 MobiDBLite consensus disorder prediction 1 19 - -
Apr7g0143 412 PANTHER BNAC03G41340D PROTEIN 19 409 - -
Apr7g0143 412 Gene3D Vaccinia Virus protein VP39 58 203 IPR029063 -
Apr7g0143 412 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 19 409 IPR025799 GO:0016274|GO:0018216
Apr7g0143 412 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 67 402 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0143 Apr-Chr7 4988176 5005044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0143 64 379 C2H2 Transcription Factor Family AT3G12270 38.066 3.74e-66 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0143 K11437 - gmx:100809174 715.301