Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0132 ATGGAAGATGAGTCTTCAGTGGTCAATTACGTTCCTCCCTTTGCAAGAGGCCTAAACGTTCTGCTTGTGAATCATGACACATTGTCTCTCATGTATCTGTCATCACTGCTTCAGCAATACACATTCAACGTCACTGCAACAGATAAAGTATCAGAGGCTGTGTCCATGATTTGCACTCATGAAGATCGGTTCAAACTTGTCATGGTTAAAGTCAACATCCCTGCCATAGATGCCTTTTCTTTTCTTAATTTATTGCATCAGAAGGACATTCCTGTCATCTTCATCTCCTCCGAAGGGTTTGATGATGTTATTGGGAGAGAACTAGCTAAAGGATCATGTTATTTCCTTGAAGAACCAATCCTTTTAAATGACTTCAAATGCTTGTGGCAACATGTGTATTCCTCGAAACCTACCTCAGCAATGGAAGCTCAAAATGCAAACAAGCTGATGACCACGCAATGCGAAGCTGGTGGATCATATGGTGAAAGGAAAGAAGATGACAATGAAAGCAAGGAAAGAGAGAAAGGAGGAGAGGTTTGGTCATCACCAATGAAATTTGAGAGCCATTATTGCATAGCCAAAGAGACAGAGGAAAGAAGAGAACACAAAGTTGGGTATGCTAGAAAGAAGCGTGTTGTGTGGACTCCTGAGCTGCATCTCAAGTTTACAAAAGCAGTAGCTTTGCTAGGCAACAAAAATGCTCGCCCAAAAGCGATACTAAATTTAATGAATGTGCCTGACCTGACATCACGCCAGATTTCAAGTCATATGCAGTGTGAAAAGCATTGGAAGAATGTACTGAAAATAACAGCTGAACTTGCAACAGGTAGCCCTGCATCAACTGCATCCATAAATGTGAGCAAGAAACAAGACCAGCTTGTAATGAACTACTCTGAAAATCATGAATCATATTTTCACAAAGTGCAAAAAGCCCTAATCAATCCATCCTTTGCACATGAATTTCCAACTGGATTGGCCAACAACGGAAGCCAAAATCTTGGTGATACAGTGGGAAACCCTCTGCCAGATGCTTCAATGGATCAAACTGAAACAGCATATGATGATATCATAGAAATGCTAGAGAAAGATTGTGACACTAATAATTGTTTTGGAAATGAGATAAACCCAGACGATGTTGAACAATACAGCGAGATGTTAAGAACAATTCTGGAAAACAGCTAG 1182 0.4044 MEDESSVVNYVPPFARGLNVLLVNHDTLSLMYLSSLLQQYTFNVTATDKVSEAVSMICTHEDRFKLVMVKVNIPAIDAFSFLNLLHQKDIPVIFISSEGFDDVIGRELAKGSCYFLEEPILLNDFKCLWQHVYSSKPTSAMEAQNANKLMTTQCEAGGSYGERKEDDNESKEREKGGEVWSSPMKFESHYCIAKETEERREHKVGYARKKRVVWTPELHLKFTKAVALLGNKNARPKAILNLMNVPDLTSRQISSHMQCEKHWKNVLKITAELATGSPASTASINVSKKQDQLVMNYSENHESYFHKVQKALINPSFAHEFPTGLANNGSQNLGDTVGNPLPDASMDQTETAYDDIIEMLEKDCDTNNCFGNEINPDDVEQYSEMLRTILENS* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0132 393 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 315 IPR045279 GO:0009736
Apr7g0132 393 SUPERFAMILY CheY-like 16 134 IPR011006 -
Apr7g0132 393 MobiDBLite consensus disorder prediction 328 346 - -
Apr7g0132 393 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 271 IPR017930 -
Apr7g0132 393 SUPERFAMILY Homeodomain-like 207 258 IPR009057 -
Apr7g0132 393 Pfam Myb-like DNA-binding domain 211 256 IPR001005 -
Apr7g0132 393 MobiDBLite consensus disorder prediction 328 347 - -
Apr7g0132 393 Gene3D - 206 268 - -
Apr7g0132 393 MobiDBLite consensus disorder prediction 156 178 - -
Apr7g0132 393 MobiDBLite consensus disorder prediction 159 178 - -
Apr7g0132 393 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR11-LIKE 9 315 - -
Apr7g0132 393 Gene3D - 18 151 - -
Apr7g0132 393 ProSiteProfiles Response regulatory domain profile. 19 133 IPR001789 GO:0000160
Apr7g0132 393 Pfam Response regulator receiver domain 20 120 IPR001789 GO:0000160
Apr7g0132 393 SMART REC_2 18 129 IPR001789 GO:0000160
Apr7g0132 393 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 209 258 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0132 Apr-Chr7 4766755 4771923 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0132 11 258 Response Regulator Gene Family AT1G68210 34.944 2.17e-39 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr7g0132 Response_reg 5.7e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0132 - - aprc:113870048 791.956