Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0118 ATGGCTGGAGTGAGGGAACAGGACCAGTACATGCCAATCGCGAACGTGATAAGGATCATGCGAAGGACTCTTCCGCCACACGCCAAGATCTCAGACGATGCCAAAGAGACGATTCAAGAGTGCGTGTCTGAGTACATCAGTTTCATCACCGCCGAAGCCAACGATCGTTGCCAGCGCGAGCAGAGGAAGACCGTTACTGCAGAGGACGTGCTTTGGGCAATGGCAAAGCTTGGCTTCGACGACTACGTTCACCCTCTCAGCCTTTACCTTCACCGCTACCGTGAGAACGAAGGAGAACACGCTTCCGCAAGACGTGCTTCTGCCTCTATTCACCCACCACCTCAGCCACCACCGCCGCTATATTCTCAAGCCTTTGGAATGTTGGACATTGACCCCTCGCAAGGGTTGTACGGGGATGATGCCTCTGCCACTGCCACAGCCTCAGCCTCAGCCTCAGCCTCAGCCCCTTATGTTCCCACCTTTGATCCTTATCCTTACATCAACCGCGACACCCTGCAGTGA 522 0.5498 MAGVREQDQYMPIANVIRIMRRTLPPHAKISDDAKETIQECVSEYISFITAEANDRCQREQRKTVTAEDVLWAMAKLGFDDYVHPLSLYLHRYRENEGEHASARRASASIHPPPQPPPPLYSQAFGMLDIDPSQGLYGDDASATATASASASASAPYVPTFDPYPYINRDTLQ* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0118 173 MobiDBLite consensus disorder prediction 100 122 - -
Apr7g0118 173 Gene3D Histone, subunit A 2 115 IPR009072 GO:0046982
Apr7g0118 173 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Apr7g0118 173 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 4 114 - -
Apr7g0118 173 SUPERFAMILY Histone-fold 7 107 IPR009072 GO:0046982
Apr7g0118 173 MobiDBLite consensus disorder prediction 136 156 - -
Apr7g0118 173 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Apr7g0118 173 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Apr7g0118 173 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Apr7g0118 173 MobiDBLite consensus disorder prediction 139 155 - -
Apr7g0118 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 74 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0118 Apr-Chr7 4329251 4329772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0118 4 108 CCAAT-HAP3 Transcription Factor Family AT5G47670 80.000 2.59e-60 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Apr7g0118 CBFD_NFYB_HMF 3.8e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0118 K08065 - gmx:547959 220.705