Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0109 ATGTCTCTGACGTCCAACTCCAAGGTCCTGCCTGCTCTCCACTCTATCAAATCGTTGCCTCCTGAGTTCAAGGTTAGTGCTGGTAATCTGACCCCCGGTCTAATGGAAAACCATGGCGATGCTAAATTGAGAAGCAGTGATGGGATTGTATCCAGTAGTTCGCAGAGCCATGCTCTAATAGGGGAGGTTTCTGAGGAAGCTCAGAACCGTGCCGGTGATATGGGTCTTTATGATGAGGATTTAGCGTACAGCGGAAAAACCTTAGAAGACAGGCCATCAATTGCTGATGAAGACTTAGAATCTGTTTCTCTGCCCTTCCCATCAATTTCAATGTCCTCTAGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTCCAAGTGGGAACTGGGAGCTGGGGAAGATAATAACAACATCTGGAACTGAATCTATCATTTCACTGCCTGATGGGAAGGTTTTGAAAGTGAAAGAAGAAAGTTTAGTACAGGCAAATCCTGATATCCTTGATGGGGTGGATGACCTCATGCAATTAAGTTATTTAAATGAACCGTCAGTTTTATTCAACCTGCAATATAGATACAATCAAAACATGATCTATACAAAAGCAGGACCTGTTTTGGTTGCTATAAATCCCTTTAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCACATGTATATGCAATCACAGACATGGCCATCCGAGAAATGATACGTGATGAAGTTAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGGAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATTTTAAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCATTTCAGTGAAACTGGAAAAATCTCTGGCGCTAATATTCAAACATTTTTACTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCCTATCATATATTTTATCAGCTGTGTGCTGGGGCACCTCCCTCTCTCCGGGGGAAGCTAAACCTACAAAATGCTGAGGACTATAAATATCTGAAACAGAGCAATTGTTATTCAATTACTGGTGTTAATGATGCAGAAGAATTTCGCTTAGTCACGGAAGCTCTTGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAACGTATTTGCAATGCTTGCTGCAGTGTTATGGTTAGGAAACATATCATTTACTGTGATTGATAATGAAAATCATGTTCAAGCTGTAGATGATGAGGGTCTGTTCCATGTAGCCAAGTTGATGGGCTGTGACATTGAAGGTCTCAAGTTGACTCTATCAACTCGCAAAATGAGAGTTGGTAATGATAACATTGTCCAAAAGTTGACACTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGCCTGTTTGATTGGTTGGTTGAACAGATAAATAAATCACTTGCTGTTGGCAAAAGACGTACGGGTAGATCAATCAGTATTCTAGATATCTACGGCTTTGAATCATTCAACAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTGCAGCAACACTTCAATCGTCATTTATTCAAGTTAGAGCAGGAGGAATATATTCAAGATGGCATAGACTGGGCTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGAGGCCCCTGGGATTATTATCCCTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACGGATTTAACGTTTGCTAACAAGCTTAAACAGCATTTAAATTCCAATTCATGCTTCAAAGGAGAAAGAGACCAAGCCTTTACTGTATGCCATTATGCTGGGGAGGTCACCTATGATACAACTGGATTCCTAGAGAAGAACAGGGACCTTTTGCACTTGGATTCGATCCGACTTCTATCCTCATGCACATGCCATCTTCCTCAAATATTTGCATCTCATATGCTCACTCAGTCTGATAAACCGGTAGTTGGTCCTTTGCACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTAGCAACAAAATTCAAGGGTCAATTGTTCCAACTGATGCAACGTTTAGAGAGCACTACTCCACATTTTATACGCTGCATTAAACCCAATAATCTCCAGTCACCTGAGTCATATGAGCAAGGGCTTGTACTGCAACAGCTGAGATGCTGCGGGGTCTTGGAGGTAGTTCGAATATCAAGATCTGGCTTTCCAACAAGAATGTCTCACCAGAAGTTTGCCAGAAGATATGGTTTTCTCCTCCTTGATAATGTTGCATCTCAGGATCCACTTAGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAGCAGGACAGATTGGTGTGCTGGAAGATACTAGAAATCGTACCCTCCATGGCATTTTACGTGTCCAAAGTTGTTTTAGGGGTTATCAAGCTCGTTGTTTTCTCAAGGAGCTTAGGGGAGGAATCACTATTTTGCAATCATTTATTAGGGGAGCCACAACCAGAAAGGCATATGCAGCTTTACTTAAGAGACATAGAGCTGCTGTTATTATACAGAAGCGGATGAAAGCAGTATTTGCAAGAAGCAGAATGAAGACTATTAGTGATGCTGCAATAGTCATACAATCAGGTATTCGTGGTTGGTTGGTCAGGAGATGCTCAGGAGATATTGTATTTTTGAAATCTGGAGACATGAAGACAAAAGAGTCAGATGAGGTTCTGGTCAAGTCGTCTTTCCTGGCTGAATTACAGCGCCGGGTACTCAAGGCTGAAGCTTCCCTGAGAGAGAAAGAAGAAGAAAATGACATCCTTCATCAACGTCTTCAACAATATGAGAGCAGATGGTCTGAGTATGAATTGAAGATGAAATCCATGGAAGAAGTGTGGCAGAAGCAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATTGATGACTCTGAAAGAAATTCAGATGCATCTGTAAATGCAAGTGATGAGCGAGATTACAGCTGGGATGTGGGAAGTAATCACAAACGCCAAGAAAGCAATGGGGCAAGATCAACGAGTGCTGGTTTAAGTGTTATAAGTCGGCTGGCTGAAGAATTTGAACATAGAAGTCAAGTATTTGGTGATGATGCTAAGTTCTTGGTTGAGGTAAAATCTGGTCAGGTAGAAGCTAGTTTGAACCCAGATCAAGAGCTTAGAAGGTTAAAACAGATGTTTGAAGCTTGGAAAAAGGATTATGGGGCAAGACTACGTGAAACAAAGGTCATTTTGAATAAACTTGGAAGTGAAGATGGCACACTTGAGAAAATGAAGAAGAAATGGTGGGGAAGAAGGAACAGTACAAGGATAAATTGA 3534 0.4092 MSLTSNSKVLPALHSIKSLPPEFKVSAGNLTPGLMENHGDAKLRSSDGIVSSSSQSHALIGEVSEEAQNRAGDMGLYDEDLAYSGKTLEDRPSIADEDLESVSLPFPSISMSSRERRWSDTTPYASKKKLQSWFQLPSGNWELGKIITTSGTESIISLPDGKVLKVKEESLVQANPDILDGVDDLMQLSYLNEPSVLFNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYGNDYIEAYKRKAIESPHVYAITDMAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLRGKLNLQNAEDYKYLKQSNCYSITGVNDAEEFRLVTEALDVVHISKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVDDEGLFHVAKLMGCDIEGLKLTLSTRKMRVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKRPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGERDQAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIRLLSSCTCHLPQIFASHMLTQSDKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRAGQIGVLEDTRNRTLHGILRVQSCFRGYQARCFLKELRGGITILQSFIRGATTRKAYAALLKRHRAAVIIQKRMKAVFARSRMKTISDAAIVIQSGIRGWLVRRCSGDIVFLKSGDMKTKESDEVLVKSSFLAELQRRVLKAEASLREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDVGSNHKRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDGTLEKMKKKWWGRRNSTRIN* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0109 1177 Gene3D - 856 904 - -
Apr7g0109 1177 Gene3D - 905 947 - -
Apr7g0109 1177 Pfam Myosin head (motor domain) 182 840 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 PANTHER MYOSIN 11 1177 - -
Apr7g0109 1177 SMART iq_5 925 947 IPR000048 GO:0005515
Apr7g0109 1177 SMART iq_5 876 898 IPR000048 GO:0005515
Apr7g0109 1177 SMART iq_5 902 924 IPR000048 GO:0005515
Apr7g0109 1177 SMART iq_5 853 875 IPR000048 GO:0005515
Apr7g0109 1177 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 11 1177 - -
Apr7g0109 1177 Gene3D - 550 742 - -
Apr7g0109 1177 ProSiteProfiles Myosin motor domain profile. 180 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 127 176 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 MobiDBLite consensus disorder prediction 1067 1081 - -
Apr7g0109 1177 Coils Coil 972 1020 - -
Apr7g0109 1177 Gene3D - 362 418 - -
Apr7g0109 1177 Gene3D - 786 853 - -
Apr7g0109 1177 Gene3D Kinesin motor domain 179 785 IPR036961 -
Apr7g0109 1177 Gene3D Myosin VI head, motor domain, U50 subdomain 419 527 - -
Apr7g0109 1177 SMART MYSc_2a 174 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 900 IPR027417 -
Apr7g0109 1177 ProSiteProfiles IQ motif profile. 856 882 IPR000048 GO:0005515
Apr7g0109 1177 ProSiteProfiles IQ motif profile. 877 906 IPR000048 GO:0005515
Apr7g0109 1177 MobiDBLite consensus disorder prediction 1045 1081 - -
Apr7g0109 1177 CDD MYSc_Myo8 194 840 IPR036022 -
Apr7g0109 1177 PRINTS Myosin heavy chain signature 210 229 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 PRINTS Myosin heavy chain signature 264 289 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 PRINTS Myosin heavy chain signature 306 333 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 PRINTS Myosin heavy chain signature 538 566 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 PRINTS Myosin heavy chain signature 591 619 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr7g0109 1177 ProSiteProfiles IQ motif profile. 926 955 IPR000048 GO:0005515
Apr7g0109 1177 Pfam IQ calmodulin-binding motif 928 944 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0109 Apr-Chr7 4089802 4111478 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0109 8 1175 Myosins gene family AT1G50360 74.766 0.0 1790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0109 - K10357 gmx:100781736 2161.34