Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0107 ATGCTCTCTACCGTGGCTCTGATTCTATCTGTTTCATCGTTGGCCTCAGCATCTCTGCAAGTGGGTTTCTATAGCTCCACATGTCCATCTGCTGAGACAATAGTGAGAAACACCGTAAACACAGCAATTTCTGTCAACCCAGGCGTAGCTGCTGGTCTCATCAGAATGCATTTCCATGATTGCTTTGTCAGGGGTTGTGACGGTTCTGTGTTACTAGCATCCACACCGGGTAACCCAATAGCTGAAAGAGACAGCTTTATCAACAACCCAAGCTTACGTGGCTTCGAGGTGATTGAGAATGCTAAGACGCAATTAGAGGCTGCATGTCCTCAAACAGTATCATGTGCTGACATTCTTGCATTCGCAGCACGAGACAGTGCCCTCAAAGCTGGTGGCATAAACTATGACGTGCCATCGGGACGCAGAGACGGTCTCATCTCTATCGGTGATGAAGTGCTAACGAATCTACCTGCACCAACCTTCAGTGCTGGTGAACTTGTTAACAATTTTGCTCGAAAGGGGTTGTCAGCAGATGAAATGGTGACTCTTTCAGGTGCACATTCAATAGGTGTATCGCATTGTTCCTCATTCTCAAAACGCTTATACTCTTTCAACGACACGTTTACACAAGACCCCTCAATGGACCCTTCTTATGCTGCATTGTTGAAAATAAAATGTCCTCCGCCACCAAGCAGCACAGATCCAACAGTGCCTCTTGATGCTTCCACATCAATTCGTTTGGACAATAACTACTATGAGGGACTTGTTAACCACCGTGGCTTGTTGACATCAGATCAAACGTTGTTAAGCAGCGAATCCACAAAGGAAATGGTTGTAGGAAATGCATACTATGGTGCAAGTTGGGCTCAGAAGTTTGCACAAGCAATGGTACACATGGGTTCCATTGAAGTGCTAACTGGCTCTGATGGTGAGATCAGGAGGCATTGTAGCTTTGTTAATTAG 963 0.4579 MLSTVALILSVSSLASASLQVGFYSSTCPSAETIVRNTVNTAISVNPGVAAGLIRMHFHDCFVRGCDGSVLLASTPGNPIAERDSFINNPSLRGFEVIENAKTQLEAACPQTVSCADILAFAARDSALKAGGINYDVPSGRRDGLISIGDEVLTNLPAPTFSAGELVNNFARKGLSADEMVTLSGAHSIGVSHCSSFSKRLYSFNDTFTQDPSMDPSYAALLKIKCPPPPSSTDPTVPLDASTSIRLDNNYYEGLVNHRGLLTSDQTLLSSESTKEMVVGNAYYGASWAQKFAQAMVHMGSIEVLTGSDGEIRRHCSFVN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0107 320 CDD secretory_peroxidase 20 319 IPR033905 GO:0004601|GO:0042744
Apr7g0107 320 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Apr7g0107 320 Gene3D - 22 320 - -
Apr7g0107 320 PANTHER PEROXIDASE 25-RELATED 11 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 Pfam Peroxidase 35 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 178 190 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 ProSiteProfiles Plant heme peroxidase family profile. 18 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 Gene3D Peroxidase, domain 2 157 299 - -
Apr7g0107 320 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 179 189 IPR019793 -
Apr7g0107 320 SUPERFAMILY Heme-dependent peroxidases 19 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Apr7g0107 320 PANTHER PEROXIDASE 11 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0107 Apr-Chr7 4019999 4021178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0107 2 320 Peroxidase AT1G05260 45.820 3.05e-91 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0107 K00430 - gmx:100786791 508.064